Physical/domain initial and boundary conditions. More...

#include <FortranInterfaceIBC.H>

Inheritance diagram for FortranInterfaceIBC:

Collaboration diagram for FortranInterfaceIBC:

Public Member Functions
	FortranInterfaceIBC ()
	Constructor. More...

virtual	~FortranInterfaceIBC ()
	Destructor. More...

virtual void	define (const ProblemDomain &a_domain, const Real &a_dx)
	Define the object. More...

virtual void	setVelFAB (Real a_uVelPtr, Real a_vVelPtr, const int a_dimInfo, const int boxlo, const int boxhi, const Real a_dew, const Real *a_dns, const IntVect &a_offset, const IntVect &a_nGhost, FArrayBox &a_uFab, FArrayBox &a_vFab, FArrayBox &a_uccFab, FArrayBox &a_vccFab, const bool a_nodal=false, const bool a_fillData=false)
	sets reference fabs for (horizontal) velocity More...

virtual void	setThickness (Real a_data_ptr, const int a_dimInfo, const int boxlo, const int boxhi, const Real a_dew, const Real a_dns, const IntVect &a_offset, const IntVect &a_nGhost=IntVect::Zero, const bool a_nodal=false)
	nGhost is the number of ghost cells in in the input data (which are ignored) More...

virtual void	setTopography (Real a_data_ptr, const int a_dimInfo, const int boxlo, const int boxhi, const Real a_dew, const Real a_dns, const IntVect &a_offset, const IntVect &a_nGhost=IntVect::Zero, const bool a_nodal=false)

virtual void	setSurface (Real a_data_ptr, const int a_dimInfo, const int boxlo, const int boxhi, const Real a_dew, const Real a_dns, const IntVect &a_offset, const IntVect &a_nGhost=IntVect::Zero, const bool a_nodal=false)
	sets storage for upper surface. More...

virtual void	setThicknessClearRegions (const Vector< Box > &a_clearRegions)
	regions where we artificially set thickness to zero More...

virtual IceThicknessIBC *	new_thicknessIBC ()
	Factory method - this object is its own factory. More...

virtual void	initialize (LevelData< FArrayBox > &a_U)
	Set up initial conditions. More...

virtual void	initializeIceGeometry (LevelSigmaCS &a_coords, const RealVect &a_dx, const RealVect &a_domainSize, const Real &a_time, const LevelSigmaCS *a_crseCoords, const int a_refRatio)
	set up initial ice state More...

virtual bool	regridIceGeometry (LevelSigmaCS &a_coords, const RealVect &a_dx, const RealVect &a_domainSize, const Real &a_time, const LevelSigmaCS *a_crseCoords, const int a_refRatio)
	update the topgraphy in LevelSigmaCS but not the thickness More...

virtual void	flattenIceGeometry (const Vector< RefCountedPtr< LevelSigmaCS > > &a_amrGeometry)
	flatten thickness and basal topography back to input FArrayBoxes More...

virtual void	flattenData (Real a_data_ptr, const int a_dimInfo, const int a_boxlo, const int a_boxhi, const Real a_dew, const Real a_dns, const IntVect &a_offset, const Vector< LevelData< FArrayBox > * > &a_amrData, const Vector< int > &a_vectRefRatio, const Vector< Real > &a_amrDx, int a_srcComp, int a_destComp, int a_nComp, const IntVect &a_nGhost, const bool a_nodal)
	flatten an arbitrary dataset back to input FArrayBoxes More...

void	flattenVelocity (Real a_uVelPtr, Real a_vVelPtr, const int a_dimInfo, const int a_boxlo, const int a_boxhi, const Real a_dew, const Real a_dns, const IntVect &a_offset, const Vector< LevelData< FArrayBox > > &a_amrVel, const Vector< int > &a_vectRefRatio, const Vector< Real > &a_amrDx, const IntVect &a_nGhost, const bool a_nodal)
	flatten velocity field to the 3D velocity data holder More...

virtual void	primBC (FArrayBox &a_WGdnv, const FArrayBox &a_Wextrap, const FArrayBox &a_W, const int &a_dir, const Side::LoHiSide &a_side, const Real &a_time)
	Set boundary fluxes. More...

virtual void	setBdrySlopes (FArrayBox &a_dW, const FArrayBox &a_W, const int &a_dir, const Real &a_time)
	Set boundary slopes. More...

virtual void	artViscBC (FArrayBox &a_F, const FArrayBox &a_U, const FArrayBox &a_divVel, const int &a_dir, const Real &a_time)
	Adjust boundary fluxes to account for artificial viscosity. More...

virtual RefCountedPtr< CompGridVTOBC >	velocitySolveBC ()
	return boundary condition for Ice velocity solve More...

void	setVerbose (bool a_verbose)

virtual void	setSurfaceHeightBCs (LevelData< FArrayBox > &a_zSurface, LevelSigmaCS &a_coords, const ProblemDomain &a_domain, const RealVect &a_dx, Real a_time, Real a_dt)
	set non-periodic ghost cells for surface height z_s. More...

virtual void	setGeometryBCs (LevelSigmaCS &a_coords, const ProblemDomain &a_domain, const RealVect &a_dx, Real a_time, Real a_dt)
	set non-periodic geometry (thickness, topography) ghost cells More...

bool	gridsSet () const
	has setGrids been called? More...

virtual void	fillTopographyHoles (Real holeVal)
	utility function to fill in holes in topography More...

virtual void	checkOK () const

const RefCountedPtr< LevelData< FArrayBox > > &	inputThicknessPtr () const

Public Member Functions inherited from IceThicknessIBC
	IceThicknessIBC ()
	Constructor. More...

virtual	~IceThicknessIBC ()
	Destructor. More...

virtual PhysIBC *	new_physIBC ()
	Factory method - this object is its own factory. More...

virtual void	velocityGhostBC (LevelData< FArrayBox > &a_velocity, const LevelSigmaCS &a_coords, const ProblemDomain &a_domain, Real a_time)
	fill ghost cells on velocity More...

virtual void	modifyVelocityRHS (LevelData< FArrayBox > &a_rhs, LevelSigmaCS &a_coords, const ProblemDomain &a_domain, Real a_time, Real a_dt)
	if appropriate, modify velocity solve RHS in a problem-dependent way. More...

virtual void	modifyFaceVelocity (LevelData< FluxBox > &a_faceVel, const LevelSigmaCS &a_coords, const ProblemDomain &a_domain) const
	if appropriate, modify face velocities in a problem-dependent way. More...

virtual void	setIceFractionBCs (LevelData< FArrayBox > &a_iceFrac, const ProblemDomain &a_domain, const RealVect &a_dx, Real a_time, Real a_dt)
	set non-periodic ghost cells for ice fraction More...

virtual void	setGridHierarchy (Vector< RefCountedPtr< LevelSigmaCS > > &a_vectCS, Vector< ProblemDomain > &a_vectDomain)
	set AMR grid hierarchy (for the BC's which need this) More...

Static Public Member Functions
static void	setFAB (Real a_data_ptr, const int a_dimInfo, const int boxlo, const int boxhi, const Real a_dew, const Real a_dns, const IntVect &a_offset, const IntVect &a_nGhost, FArrayBox &a_fab, FArrayBox &a_ccFab, const bool a_nodal, const bool a_verbose=false)
	static function to set reference fabs More...

static void	setGrids (DisjointBoxLayout &a_grids, const Box &a_gridBox, const ProblemDomain &a_domain, bool a_verbose)
	set grids using Boxes passed in from CISM More...

Protected Member Functions
void	setupBCs ()
	set up bc's based on parmparse inputs More...

Protected Attributes
Real	m_boundaryThickness

RealVect	m_domainSize

bool	m_verbose

bool	m_isBCsetUp

bool	m_extrapBoundary

RefCountedPtr< CompGridVTOBC >	m_velBCs

DisjointBoxLayout	m_grids

bool	m_gridsSet

FArrayBox	m_inputThickness
	alias to data array passed in from glimmer-CISM More...

bool	m_nodalThickness
	true if m_inputThickness is nodal More...

FArrayBox	m_ccInputThickness
	cell-centered input thickness More...

RealVect	m_inputThicknessDx

IntVect	m_thicknessGhost

RefCountedPtr< LevelData< FArrayBox > >	m_inputThicknessLDF
	distributed version of thickness More...

Vector< Box >	m_thicknessClearRegions
	regions where we will artificially set ice thickness to zero More...

FArrayBox	m_inputTopography
	alias to data array passed in from glimmer-CISM More...

bool	m_nodalTopography

FArrayBox	m_ccInputTopography
	cell-centered input topography More...

RealVect	m_inputTopographyDx

IntVect	m_topographyGhost

RefCountedPtr< LevelData< FArrayBox > >	m_inputTopographyLDF
	distributed version of topography More...

FArrayBox	m_inputSurface
	alias to data array passed in from glimmer-CISM More...

bool	m_nodalSurface

FArrayBox	m_ccInputSurface
	cell-centered input upper ice surface More...

RealVect	m_inputSurfaceDx

IntVect	m_surfaceGhost

RefCountedPtr< LevelData< FArrayBox > >	m_inputSurfaceLDF
	distributed version of topography More...

Detailed Description

Physical/domain initial and boundary conditions.

Constructor & Destructor Documentation

◆ FortranInterfaceIBC()

FortranInterfaceIBC::FortranInterfaceIBC ( )

Constructor.

References m_gridsSet, m_isBCsetUp, m_thicknessClearRegions, m_thicknessGhost, m_topographyGhost, and m_verbose.

Referenced by new_thicknessIBC().

◆ ~FortranInterfaceIBC()

FortranInterfaceIBC::~FortranInterfaceIBC ( )

virtual

Destructor.

References m_verbose.

Member Function Documentation

◆ artViscBC()

void FortranInterfaceIBC::artViscBC	(	FArrayBox &	a_F,
		const FArrayBox &	a_U,
		const FArrayBox &	a_divVel,
		const int &	a_dir,
		const Real &	a_time
	)

virtual

Adjust boundary fluxes to account for artificial viscosity.

Implements IceThicknessIBC.

◆ checkOK()

void FortranInterfaceIBC::checkOK ( ) const

virtual

Reimplemented from IceThicknessIBC.

References m_inputTopography, and m_verbose.

Referenced by gridsSet().

◆ define()

void FortranInterfaceIBC::define	(	const ProblemDomain &	a_domain,
		const Real &	a_dx
	)

virtual

Define the object.

Set the problem domain index space and the grid spacing for this initial and boundary condition object.

Set the problem domain index space and the grid spacing for this initial and boundary condition object. Just calls base-class define

Reimplemented from IceThicknessIBC.

◆ fillTopographyHoles()

void FortranInterfaceIBC::fillTopographyHoles ( Real a_holeVal )

virtual

utility function to fill in holes in topography

looks for isolated values of holeVal and replaces then with average of neighbors

References m_inputTopography, and m_verbose.

Referenced by gridsSet().

◆ flattenData()

void FortranInterfaceIBC::flattenData	(	Real *	a_data_ptr,
		const int *	a_dimInfo,
		const int *	a_boxlo,
		const int *	a_boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const Vector< LevelData< FArrayBox > * > &	a_amrData,
		const Vector< int > &	a_vectRefRatio,
		const Vector< Real > &	a_amrDx,
		int	a_srcComp,
		int	a_destComp,
		int	a_nComp,
		const IntVect &	a_nGhost,
		const bool	a_nodal
	)

virtual

flatten an arbitrary dataset back to input FArrayBoxes

References FillFromReference(), gridsSet(), m_grids, m_gridsSet, m_thicknessGhost, m_verbose, setFAB(), and setGrids().

◆ flattenIceGeometry()

void FortranInterfaceIBC::flattenIceGeometry ( const Vector< RefCountedPtr< LevelSigmaCS > > & a_amrGeometry )

virtual

flatten thickness and basal topography back to input FArrayBoxes

re-store in m_inputThickness and m_inputTopography – not const because we modify the values in the data holders

References flattenCellData(), m_ccInputSurface, m_ccInputThickness, m_ccInputTopography, m_inputSurface, m_inputSurfaceDx, m_inputSurfaceLDF, m_inputThickness, m_inputThicknessDx, m_inputThicknessLDF, m_inputTopography, m_inputTopographyDx, m_inputTopographyLDF, m_nodalSurface, m_nodalThickness, m_nodalTopography, and m_verbose.

◆ flattenVelocity()

void FortranInterfaceIBC::flattenVelocity	(	Real *	a_uVelPtr,
		Real *	a_vVelPtr,
		const int *	a_dimInfo,
		const int *	a_boxlo,
		const int *	a_boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const Vector< LevelData< FArrayBox > * > &	a_amrVel,
		const Vector< int > &	a_vectRefRatio,
		const Vector< Real > &	a_amrDx,
		const IntVect &	a_nGhost,
		const bool	a_nodal
	)

flatten velocity field to the 3D velocity data holder

References m_grids, m_verbose, and setVelFAB().

◆ gridsSet()

bool FortranInterfaceIBC::gridsSet ( ) const

inline

has setGrids been called?

References checkOK(), fillTopographyHoles(), and m_gridsSet.

Referenced by flattenData(), setSurface(), setThickness(), setTopography(), and setVelFAB().

◆ initialize()

void FortranInterfaceIBC::initialize ( LevelData< FArrayBox > & a_U )

virtual

Set up initial conditions.

shouldn't be here...

Implements IceThicknessIBC.

◆ initializeIceGeometry()

void FortranInterfaceIBC::initializeIceGeometry	(	LevelSigmaCS &	a_coords,
		const RealVect &	a_dx,
		const RealVect &	a_domainSize,
		const Real &	a_time,
		const LevelSigmaCS *	a_crseCoords,
		const int	a_refRatio
	)

virtual

set up initial ice state

reads info from ParmParse and sets up ice sheet geometry

Implements IceThicknessIBC.

References LevelSigmaCS::exchangeTopography(), ExtrapGhostCells(), FillFromReference(), LevelSigmaCS::getH(), LevelSigmaCS::getTopography(), LevelSigmaCS::grids(), LevelSigmaCS::interpFromCoarse(), m_extrapBoundary, m_inputThickness, m_inputThicknessDx, m_inputThicknessLDF, m_inputTopography, m_inputTopographyDx, m_inputTopographyLDF, m_verbose, ReflectGhostCells(), and LevelSigmaCS::setBackgroundSlope().

◆ inputThicknessPtr()

const RefCountedPtr<LevelData<FArrayBox> >& FortranInterfaceIBC::inputThicknessPtr ( ) const

inline

References m_inputThicknessLDF.

◆ new_thicknessIBC()

IceThicknessIBC * FortranInterfaceIBC::new_thicknessIBC ( )

virtual

Factory method - this object is its own factory.

Return a pointer to a new IceThicknessIBC object with m_isDefined = false (i.e., its define() must be called before it is used).

Return a pointer to a new PhysIBC object with m_isDefined = false (i.e., its define() must be called before it is used).

Implements IceThicknessIBC.

References FortranInterfaceIBC(), m_ccInputThickness, m_ccInputTopography, m_grids, m_gridsSet, m_inputThickness, m_inputThicknessDx, m_inputThicknessLDF, m_inputTopography, m_inputTopographyDx, m_inputTopographyLDF, m_thicknessGhost, m_topographyGhost, and m_verbose.

◆ primBC()

void FortranInterfaceIBC::primBC	(	FArrayBox &	a_WGdnv,
		const FArrayBox &	a_Wextrap,
		const FArrayBox &	a_W,
		const int &	a_dir,
		const Side::LoHiSide &	a_side,
		const Real &	a_time
	)

virtual

Set boundary fluxes.

Implements IceThicknessIBC.

◆ regridIceGeometry()

bool FortranInterfaceIBC::regridIceGeometry	(	LevelSigmaCS &	a_coords,
		const RealVect &	a_dx,
		const RealVect &	a_domainSize,
		const Real &	a_time,
		const LevelSigmaCS *	a_crseCoords,
		const int	a_refRatio
	)

virtual

update the topgraphy in LevelSigmaCS but not the thickness

Reimplemented from IceThicknessIBC.

References FillFromReference(), LevelSigmaCS::getTopography(), LevelSigmaCS::interpFromCoarse(), m_inputThicknessDx, m_inputTopography, m_inputTopographyDx, m_topographyGhost, and m_verbose.

◆ setBdrySlopes()

void FortranInterfaceIBC::setBdrySlopes	(	FArrayBox &	a_dW,
		const FArrayBox &	a_W,
		const int &	a_dir,
		const Real &	a_time
	)

virtual

Set boundary slopes.

The boundary slopes in a_dW are already set to one sided difference approximations. If this function doesn't change them they will be used for the slopes at the boundaries.

Implements IceThicknessIBC.

◆ setFAB()

void FortranInterfaceIBC::setFAB	(	Real *	a_data_ptr,
		const int *	a_dimInfo,
		const int *	boxlo,
		const int *	boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const IntVect &	a_nGhost,
		FArrayBox &	a_fab,
		FArrayBox &	a_ccFab,
		const bool	a_nodal,
		const bool	a_verbose = `false`
	)

static

static function to set reference fabs

if a_nodal is false, then data is cell-centered and both a_fab and a_ccFab are set to be aliases which point to a_data_ptr. If a_nodal is true, then a_fab is set to be an aliase which points to a_data_ptr, while a_ccFab is allocated and filled with cell-averaged data.

Referenced by flattenData(), fortranInterfaceFlux::setFluxVal(), setSurface(), setThickness(), and setTopography().

◆ setGeometryBCs()

void FortranInterfaceIBC::setGeometryBCs	(	LevelSigmaCS &	a_coords,
		const ProblemDomain &	a_domain,
		const RealVect &	a_dx,
		Real	a_time,
		Real	a_dt
	)

virtual

set non-periodic geometry (thickness, topography) ghost cells

set non-periodic ghost cells for thickness & topography

Reimplemented from IceThicknessIBC.

References ExtrapGhostCells(), LevelSigmaCS::getH(), LevelSigmaCS::getTopography(), m_extrapBoundary, and ReflectGhostCells().

Referenced by setVerbose().

◆ setGrids()

void FortranInterfaceIBC::setGrids	(	DisjointBoxLayout &	a_grids,
		const Box &	a_gridBox,
		const ProblemDomain &	a_domain,
		bool	a_verbose
	)

static

set grids using Boxes passed in from CISM

set grids using Boxes passed in from Glimmer-CISM

creates a DisjointBoxLayout using the grid boxes and processor distribution used by CISM.

Referenced by flattenData(), fortranInterfaceFlux::setFluxVal(), setSurface(), setThickness(), setTopography(), setVelFAB(), and setVerbose().

◆ setSurface()

void FortranInterfaceIBC::setSurface	(	Real *	a_data_ptr,
		const int *	a_dimInfo,
		const int *	boxlo,
		const int *	boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const IntVect &	a_nGhost = `IntVect::Zero`,
		const bool	a_nodal = `false`
	)

virtual

sets storage for upper surface.

Currently only needed in order to return BISICLES-computed upper surface to CISM

Parameters

a_offset amount to offset indices (due to C-Fortran numbering, for example)

References gridsSet(), m_ccInputSurface, m_grids, m_gridsSet, m_inputSurface, m_inputSurfaceDx, m_inputSurfaceLDF, m_nodalSurface, m_surfaceGhost, m_verbose, setFAB(), and setGrids().

◆ setSurfaceHeightBCs()

void FortranInterfaceIBC::setSurfaceHeightBCs	(	LevelData< FArrayBox > &	a_zSurface,
		LevelSigmaCS &	a_coords,
		const ProblemDomain &	a_domain,
		const RealVect &	a_dx,
		Real	a_time,
		Real	a_dt
	)

virtual

set non-periodic ghost cells for surface height z_s.

Reimplemented from IceThicknessIBC.

References ExtrapGhostCells(), m_extrapBoundary, and ReflectGhostCells().

Referenced by setVerbose().

◆ setThickness()

void FortranInterfaceIBC::setThickness	(	Real *	a_data_ptr,
		const int *	a_dimInfo,
		const int *	boxlo,
		const int *	boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const IntVect &	a_nGhost = `IntVect::Zero`,
		const bool	a_nodal = `false`
	)

virtual

nGhost is the number of ghost cells in in the input data (which are ignored)

Parameters

a_offset amount to offset indices (due to C-Fortran numbering, for example)

References gridsSet(), m_ccInputThickness, m_grids, m_gridsSet, m_inputThickness, m_inputThicknessDx, m_inputThicknessLDF, m_nodalThickness, m_thicknessClearRegions, m_thicknessGhost, m_verbose, setFAB(), and setGrids().

◆ setThicknessClearRegions()

void FortranInterfaceIBC::setThicknessClearRegions ( const Vector< Box > & a_clearRegions )

virtual

regions where we artificially set thickness to zero

this is done in setThickness, for lack of a better place, so this needs to be set before setThickness is called. a_clearRegions defines logically-rectangular regions where the thickness is artificially set to zero. These regions are defined relative to the original input data (i.e. before any shifting due to ghost cells)

References m_thicknessClearRegions.

◆ setTopography()

void FortranInterfaceIBC::setTopography	(	Real *	a_data_ptr,
		const int *	a_dimInfo,
		const int *	boxlo,
		const int *	boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const IntVect &	a_nGhost = `IntVect::Zero`,
		const bool	a_nodal = `false`
	)

virtual

Parameters

a_offset amount to offset indices (due to C-Fortran numbering, for example)

References gridsSet(), m_ccInputTopography, m_grids, m_gridsSet, m_inputTopography, m_inputTopographyDx, m_inputTopographyLDF, m_nodalTopography, m_topographyGhost, m_verbose, setFAB(), and setGrids().

◆ setupBCs()

void FortranInterfaceIBC::setupBCs ( )

protected

set up bc's based on parmparse inputs

References FIBC_Dirichlet, FIBC_iceDivide, FIBC_iceStreamXBC, FIBC_Neumann, iceDirichletBC_FIBC(), iceDivideBC_FIBC(), iceNeumannBC_FIBC(), iceStreamXBC_FIBC(), m_isBCsetUp, and m_velBCs.

Referenced by velocitySolveBC().

◆ setVelFAB()

void FortranInterfaceIBC::setVelFAB	(	Real *	a_uVelPtr,
		Real *	a_vVelPtr,
		const int *	a_dimInfo,
		const int *	boxlo,
		const int *	boxhi,
		const Real *	a_dew,
		const Real *	a_dns,
		const IntVect &	a_offset,
		const IntVect &	a_nGhost,
		FArrayBox &	a_uFab,
		FArrayBox &	a_vFab,
		FArrayBox &	a_uccFab,
		FArrayBox &	a_vccFab,
		const bool	a_nodal = `false`,
		const bool	a_fillData = `false`
	)

virtual

sets reference fabs for (horizontal) velocity

version of setFAB for (horizontal) velocity data

if a_nodal is false, then data is cell-centered and both a_fab and a_ccFab are set to be aliases which point to a_data_ptr. If a_nodal is true, then a_fab is set to be an aliase which points to a_data_ptr, while a_ccFab is allocated and filled with cell-averaged data.

References gridsSet(), m_grids, m_gridsSet, m_verbose, and setGrids().

Referenced by flattenVelocity().

◆ setVerbose()

void FortranInterfaceIBC::setVerbose ( bool a_verbose )

inline

References m_verbose, setGeometryBCs(), setGrids(), and setSurfaceHeightBCs().

◆ velocitySolveBC()

RefCountedPtr< CompGridVTOBC > FortranInterfaceIBC::velocitySolveBC ( )

virtual

return boundary condition for Ice velocity solve

eventually would like this to be a BCHolder

Implements IceThicknessIBC.

References m_isBCsetUp, m_velBCs, and setupBCs().

Member Data Documentation

◆ m_boundaryThickness

Real FortranInterfaceIBC::m_boundaryThickness

protected

◆ m_ccInputSurface

FArrayBox FortranInterfaceIBC::m_ccInputSurface

protected

cell-centered input upper ice surface

if nodalSurface is false, this is identical to m_inputSurface; if nodalSurface is true, this contains the cell-averaged version of the inputSurface

Referenced by flattenIceGeometry(), and setSurface().

◆ m_ccInputThickness

FArrayBox FortranInterfaceIBC::m_ccInputThickness

protected

cell-centered input thickness

if nodalThickness is false, this is identical to m_inputThickness. If nodalThickness is true, then this contains the cell-averaged version of the inputThickness

Referenced by flattenIceGeometry(), new_thicknessIBC(), and setThickness().

◆ m_ccInputTopography

FArrayBox FortranInterfaceIBC::m_ccInputTopography

protected

cell-centered input topography

if nodalTopography is false, this is identical to m_inputTopography. if nodalTopography is true, this contains the cell-averaged version of the inputTopography

Referenced by flattenIceGeometry(), new_thicknessIBC(), and setTopography().

◆ m_domainSize

RealVect FortranInterfaceIBC::m_domainSize

protected

◆ m_extrapBoundary

bool FortranInterfaceIBC::m_extrapBoundary

protected

Referenced by initializeIceGeometry(), setGeometryBCs(), and setSurfaceHeightBCs().

◆ m_grids

DisjointBoxLayout FortranInterfaceIBC::m_grids

protected

Referenced by flattenData(), flattenVelocity(), new_thicknessIBC(), setSurface(), setThickness(), setTopography(), and setVelFAB().

◆ m_gridsSet

bool FortranInterfaceIBC::m_gridsSet

protected

Referenced by flattenData(), FortranInterfaceIBC(), gridsSet(), new_thicknessIBC(), setSurface(), setThickness(), setTopography(), and setVelFAB().

◆ m_inputSurface

FArrayBox FortranInterfaceIBC::m_inputSurface

protected

alias to data array passed in from glimmer-CISM

Referenced by flattenIceGeometry(), and setSurface().

◆ m_inputSurfaceDx

RealVect FortranInterfaceIBC::m_inputSurfaceDx

protected

Referenced by flattenIceGeometry(), and setSurface().

◆ m_inputSurfaceLDF

RefCountedPtr<LevelData<FArrayBox> > FortranInterfaceIBC::m_inputSurfaceLDF

protected

distributed version of topography

Referenced by flattenIceGeometry(), and setSurface().

◆ m_inputThickness

FArrayBox FortranInterfaceIBC::m_inputThickness

protected

alias to data array passed in from glimmer-CISM

Referenced by flattenIceGeometry(), initializeIceGeometry(), new_thicknessIBC(), and setThickness().

◆ m_inputThicknessDx

RealVect FortranInterfaceIBC::m_inputThicknessDx

protected

Referenced by flattenIceGeometry(), initializeIceGeometry(), new_thicknessIBC(), regridIceGeometry(), and setThickness().

◆ m_inputThicknessLDF

RefCountedPtr<LevelData<FArrayBox> > FortranInterfaceIBC::m_inputThicknessLDF

protected

distributed version of thickness

Referenced by flattenIceGeometry(), initializeIceGeometry(), inputThicknessPtr(), new_thicknessIBC(), and setThickness().

◆ m_inputTopography

FArrayBox FortranInterfaceIBC::m_inputTopography

protected

alias to data array passed in from glimmer-CISM

Referenced by checkOK(), fillTopographyHoles(), flattenIceGeometry(), initializeIceGeometry(), new_thicknessIBC(), regridIceGeometry(), and setTopography().

◆ m_inputTopographyDx

RealVect FortranInterfaceIBC::m_inputTopographyDx

protected

Referenced by flattenIceGeometry(), initializeIceGeometry(), new_thicknessIBC(), regridIceGeometry(), and setTopography().

◆ m_inputTopographyLDF

RefCountedPtr<LevelData<FArrayBox> > FortranInterfaceIBC::m_inputTopographyLDF

protected

distributed version of topography

Referenced by flattenIceGeometry(), initializeIceGeometry(), new_thicknessIBC(), and setTopography().

◆ m_isBCsetUp

bool FortranInterfaceIBC::m_isBCsetUp

protected

Referenced by FortranInterfaceIBC(), setupBCs(), and velocitySolveBC().

◆ m_nodalSurface

bool FortranInterfaceIBC::m_nodalSurface

protected

Referenced by flattenIceGeometry(), and setSurface().

◆ m_nodalThickness

bool FortranInterfaceIBC::m_nodalThickness

protected

true if m_inputThickness is nodal

Referenced by flattenIceGeometry(), and setThickness().

◆ m_nodalTopography

bool FortranInterfaceIBC::m_nodalTopography

protected

Referenced by flattenIceGeometry(), and setTopography().

◆ m_surfaceGhost

IntVect FortranInterfaceIBC::m_surfaceGhost

protected

Referenced by setSurface().

◆ m_thicknessClearRegions

Vector<Box> FortranInterfaceIBC::m_thicknessClearRegions

protected

regions where we will artificially set ice thickness to zero

Referenced by FortranInterfaceIBC(), setThickness(), and setThicknessClearRegions().

◆ m_thicknessGhost

IntVect FortranInterfaceIBC::m_thicknessGhost

protected

Referenced by flattenData(), FortranInterfaceIBC(), new_thicknessIBC(), and setThickness().

◆ m_topographyGhost

IntVect FortranInterfaceIBC::m_topographyGhost

protected

Referenced by FortranInterfaceIBC(), new_thicknessIBC(), regridIceGeometry(), and setTopography().

◆ m_velBCs

RefCountedPtr<CompGridVTOBC> FortranInterfaceIBC::m_velBCs

protected

Referenced by setupBCs(), and velocitySolveBC().

◆ m_verbose

bool FortranInterfaceIBC::m_verbose

protected

Referenced by checkOK(), fillTopographyHoles(), flattenData(), flattenIceGeometry(), flattenVelocity(), FortranInterfaceIBC(), initializeIceGeometry(), new_thicknessIBC(), regridIceGeometry(), setSurface(), setThickness(), setTopography(), setVelFAB(), setVerbose(), and ~FortranInterfaceIBC().

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Constructor & Destructor Documentation

◆ FortranInterfaceIBC()

◆ ~FortranInterfaceIBC()

Member Function Documentation

◆ artViscBC()

◆ checkOK()

◆ define()

◆ fillTopographyHoles()

◆ flattenData()

◆ flattenIceGeometry()

◆ flattenVelocity()

◆ gridsSet()

◆ initialize()

◆ initializeIceGeometry()

◆ inputThicknessPtr()

◆ new_thicknessIBC()

◆ primBC()

◆ regridIceGeometry()

◆ setBdrySlopes()

◆ setFAB()

◆ setGeometryBCs()

◆ setGrids()

◆ setSurface()

◆ setSurfaceHeightBCs()

◆ setThickness()

◆ setThicknessClearRegions()

◆ setTopography()

◆ setupBCs()

◆ setVelFAB()

◆ setVerbose()

◆ velocitySolveBC()

Member Data Documentation

◆ m_boundaryThickness

◆ m_ccInputSurface

◆ m_ccInputThickness

◆ m_ccInputTopography

◆ m_domainSize

◆ m_extrapBoundary

◆ m_grids

◆ m_gridsSet

◆ m_inputSurface

◆ m_inputSurfaceDx

◆ m_inputSurfaceLDF

◆ m_inputThickness

◆ m_inputThicknessDx

◆ m_inputThicknessLDF

◆ m_inputTopography

◆ m_inputTopographyDx

◆ m_inputTopographyLDF

◆ m_isBCsetUp

◆ m_nodalSurface

◆ m_nodalThickness

◆ m_nodalTopography

◆ m_surfaceGhost

◆ m_thicknessClearRegions

◆ m_thicknessGhost

◆ m_topographyGhost

◆ m_velBCs

◆ m_verbose