Chombo + EB: AMRIO.H Source File

00001 #ifdef CH_LANG_CC
00002 /*
00003 *      _______              __
00004 *     / ___/ /  ___  __ _  / /  ___
00005 *    / /__/ _ \/ _ \/  V \/ _ \/ _ \
00006 *    \___/_//_/\___/_/_/_/_.__/\___/
00007 *    Please refer to Copyright.txt, in Chombo's root directory.
00008 */
00009 #endif
00010 
00011 // DTGraves, Fri, Dec 3, 1999
00012 
00013 #ifndef _AMRIO_H_
00014 #define _AMRIO_H_
00015 
00016 #include "REAL.H"
00017 
00018 #ifndef WRAPPER
00019 #include "LevelData.H"
00020 #include "REAL.H"
00021 #include "Vector.H"
00022 #include "FArrayBox.H"
00023 #include "IntVectSet.H"
00024 #include "RealVect.H"
00025 #include <string>
00026 #include "NamespaceHeader.H"
00027 using std::string;
00028 using std::istream;
00029 #endif
00030 
00031 #ifdef CH_USE_HDF5
00033 
00052 void
00053 WriteAMRHierarchyHDF5(const string& filename,
00054                       const Vector<DisjointBoxLayout>& a_vectGrids,
00055                       const Vector<LevelData<FArrayBox>* > & a_vectData,
00056                       const Vector<string>& a_vectNames,
00057                       const Box& a_domain,
00058                       const Real& a_dx,
00059                       const Real& a_dt,
00060                       const Real& a_time,
00061                       const Vector<int>& a_vectRatio,
00062                       const int& a_numLevels);
00063 
00065 
00084 void
00085 WriteAMRHierarchyHDF5(HDF5Handle& handle,
00086                       const Vector<DisjointBoxLayout>& a_vectGrids,
00087                       const Vector<LevelData<FArrayBox>* > & a_vectData,
00088                       const Vector<string>& a_vectNames,
00089                       const Box& a_domain,
00090                       const Real& a_dx,
00091                       const Real& a_dt,
00092                       const Real& a_time,
00093                       const Vector<int>& a_vectRatio,
00094                       const int& a_numLevels);
00095 
00097 
00111 void
00112 WriteAMRHierarchyHDF5(const string& filename,
00113                       const Vector<DisjointBoxLayout>& a_vectGrids,
00114                       const Vector<LevelData<FArrayBox>* > & a_vectData,
00115                       const Box& a_domain,
00116                       const Vector<int>& a_vectRatio,
00117                       const int& a_numLevels);
00118 
00120 
00134 void
00135 WriteAMRHierarchyHDF5(HDF5Handle& handle,
00136                       const Vector<DisjointBoxLayout>& a_vectGrids,
00137                       const Vector<LevelData<FArrayBox>* > & a_vectData,
00138                       const Box& a_domain,
00139                       const Vector<int>& a_vectRatio,
00140                       const int& a_numLevels);
00141 
00142 #ifndef WRAPPER
00144 
00170 int
00171 ReadAMRHierarchyHDF5(const string& filename,
00172                      Vector<DisjointBoxLayout>& a_vectGrids,
00173                      Vector<LevelData<FArrayBox>* > & a_vectData,
00174                      Vector<string>& a_vectNames,
00175                      Box& a_domain,
00176                      Real& a_dx,
00177                      Real& a_dt,
00178                      Real& a_time,
00179                      Vector<int>& a_refRatio,
00180                      int& a_numLevels);
00181 
00183 
00209 int
00210 ReadAMRHierarchyHDF5(HDF5Handle& handle,
00211                      Vector<DisjointBoxLayout>& a_vectGrids,
00212                      Vector<LevelData<FArrayBox>* > & a_vectData,
00213                      Vector<string>& a_vectNames,
00214                      Box& a_domain,
00215                      Real& a_dx,
00216                      Real& a_dt,
00217                      Real& a_time,
00218                      Vector<int>& a_refRatio,
00219                      int& a_numLevels);
00220 
00222 
00244 int
00245 ReadAMRHierarchyHDF5(const string& filename,
00246                      Vector<DisjointBoxLayout>& a_vectGrids,
00247                      Vector<LevelData<FArrayBox>* > & a_vectData,
00248                      Box& a_domain,
00249                      Vector<int>& a_refRatio,
00250                      int& a_numLevels);
00251 
00253 
00275 int
00276 ReadAMRHierarchyHDF5(HDF5Handle& handle,
00277                      Vector<DisjointBoxLayout>& a_vectGrids,
00278                      Vector<LevelData<FArrayBox>* > & a_vectData,
00279                      Box& a_domain,
00280                      Vector<int>& a_refRatio,
00281                      int& a_numLevels);
00282 // ///
00302  int
00303  ReadEBAMRASCII(const string& filename,
00304                 Vector<DisjointBoxLayout>& a_vectGrids,
00305                 Vector<LevelData<FArrayBox>* > & a_vectData,
00306                 Vector<string>& a_vectNames,
00307                 Box& a_domain,
00308                 Vector<IntVectSet>& a_coveredCells,
00309                Vector<IntVectSet>& a_multiValuedCells,
00310                Vector<int>& a_refRatio,
00311                 int& a_numLevels);
00312 
00313 #endif
00314 
00316 
00322 void viewIVS(const IntVectSet* a_dataPtr, const Box* a_domain);
00323 
00325 
00330 void viewVectorBox(const Vector<Box>* a_dataPtr, const Box* a_domain);
00331 
00332 
00334 
00338 void writeFAB(const FArrayBox* a_dataPtr);
00339 
00341 
00346 void viewFAB(const FArrayBox* a_dataPtr);
00347 
00349 
00351 void viewBFI(const BaseFab<int>* a_dataPtr);
00352 
00354 
00356 void viewBFIV(const BaseFab<IntVect>* a_dataPtr);
00357 
00359 
00361 void viewBFRV(const BaseFab<RealVect>* a_dataPtr);
00362 
00364 
00369 void browseFAB(const FArrayBox* a_dataPtr);
00370 
00372 
00376 void
00377 writeBFR(const BaseFab<Real>* a_dataPtr);
00378 
00380 
00385 void
00386 viewBFR(const BaseFab<Real>* a_dataPtr);
00387 
00389 
00395 void
00396 writeFABname(const FArrayBox      * a_dataPtr,
00397              const char           * a_filename,
00398              const Vector<string> & a_compNames = Vector<string>());
00399 
00401 
00408 void
00409 viewLevelNoFine(const LevelData<FArrayBox>* a_dataPtr,
00410                 const LevelData<FArrayBox>* a_dataFinePtr,
00411                 int a_refRatio);
00412 
00414 
00418 void
00419 writeLevel(const LevelData<FArrayBox>* a_dataPtr);
00420 
00422 
00427 void
00428 viewLevel(const LevelData<FArrayBox>* a_dataPtr);
00429 
00431 
00436 void
00437 browseLevel(const LevelData<FArrayBox>* a_dataPtr);
00438 
00440 
00446 void
00447 viewLevelNoGhost(const LevelData<FArrayBox>* a_dataPtr);
00448 
00450 
00454 void
00455 writeLevelname(const LevelData<FArrayBox>* a_dataPtr,
00456                const char*                 a_filename);
00457 
00459 
00463 void
00464 writeVectorLevelName(const Vector<LevelData<FArrayBox>*>* a_dataPtr,
00465                      const Vector<int>*                   a_refRatios,
00466                      const char*                          a_filename);
00467 
00469 
00474 void
00475 writeDBL(const DisjointBoxLayout* a_dataPtr);
00476 
00478 
00485 void
00486 viewDBL(const DisjointBoxLayout* a_dataPtr);
00487 
00488 void writeCopier(const Copier* a_copier);
00489 
00490 void viewCopier(const Copier* a_copier);
00491 
00493 
00498 void
00499 writeDBLname(const DisjointBoxLayout* a_dataPtr,
00500              const char*              a_filename);
00501 
00503 
00522 void
00523 WritePartialAMRHierarchyHDF5(const string& filename,
00524                              const Vector<DisjointBoxLayout>& a_vectGrids,
00525                              const Vector<LevelData<FArrayBox>* > & a_vectData,
00526                              const Vector<string>& a_vectNames,
00527                              const Box& a_baseDomain,
00528                              const Real& a_baseDx,
00529                              const Real& a_dt,
00530                              const Real& a_time,
00531                              const Vector<int>& a_vectRatio,
00532                              const Interval& a_levels);
00533 
00534 #endif // CH_USE_HDF5
00535 
00536 // //write a fab out in ascii very slowly
00537  extern void
00538  writeAFabASCII(std::ostream& os, const FArrayBox& fab);
00539 
00540 // //read a  fab in, in ascii, very slowly
00541  extern void
00542  readAFabASCII(istream& is, FArrayBox& fab);
00543 
00544  void writeAFabASCII(std::ostream& os, const FArrayBox& fab);
00545 
00546  void readAFabASCII(istream& is, FArrayBox& fab);
00547 
00548 // ///
00566  void
00567 WriteAMRHierarchyASCII(const string& filename,
00568                        const Vector<DisjointBoxLayout>& a_vectGrids,
00569                        const Vector<LevelData<FArrayBox>* > & a_vectData,
00570                        const Vector<string>& a_vectNames,
00571                        const Box& a_domain,
00572                        const Real& a_dx,
00573                        const Real& a_dt,
00574                        const Real& a_time,
00575                        const Vector<int>& a_vectRatio,
00576                        const int& a_numLevels);
00577 
00578 // ///
00602 int
00603 ReadAMRHierarchyASCII(const string& filename,
00604                       Vector<DisjointBoxLayout>& a_vectGrids,
00605                       Vector<LevelData<FArrayBox>* > & a_vectData,
00606                       Vector<string>& a_vectNames,
00607                       Box& a_domain,
00608                       Real& a_dx,
00609                       Real& a_dt,
00610                       Real& a_time,
00611                       Vector<int>& a_vectRatio,
00612                       int& a_numLevels);
00613 
00614 #include "NamespaceFooter.H"
00615 #endif