LDFIO.H Source File

00001 /* _______              __
00002   / ___/ /  ___  __ _  / /  ___
00003  / /__/ _ \/ _ \/  ' \/ _ \/ _ \
00004  \___/_//_/\___/_/_/_/_.__/\___/ 
00005 */
00006 //
00007 // This software is copyright (C) by the Lawrence Berkeley
00008 // National Laboratory.  Permission is granted to reproduce
00009 // this software for non-commercial purposes provided that
00010 // this notice is left intact.
00011 // 
00012 // It is acknowledged that the U.S. Government has rights to
00013 // this software under Contract DE-AC03-765F00098 between
00014 // the U.S.  Department of Energy and the University of
00015 // California.
00016 //
00017 // This software is provided as a professional and academic
00018 // contribution for joint exchange. Thus it is experimental,
00019 // is provided ``as is'', with no warranties of any kind
00020 // whatsoever, no support, no promise of updates, or printed
00021 // documentation. By using this software, you acknowledge
00022 // that the Lawrence Berkeley National Laboratory and
00023 // Regents of the University of California shall have no
00024 // liability with respect to the infringement of other
00025 // copyrights by any part of this software.
00026 //
00027 // DTGraves, Fri, Dec 3, 1999
00028 
00029 #ifndef _AMRIO_
00030 #define _AMRIO_
00031 #include "LevelData.H"
00032 #include "REAL.H"
00033 #include "Vector.H"
00034 #include "FArrayBox.H"
00035 #include "IntVectSet.H"
00036 #include <string>
00037 using std::string;
00038 using std::istream;
00039 
00040 #ifdef HDF5
00041 
00042 
00061 void
00062 WriteAMRHierarchyHDF5(const string& filename,                             
00063                       const Vector<DisjointBoxLayout>& a_vectGrids, 
00064                       const Vector<LevelData<FArrayBox>* > & a_vectData, 
00065                       const Vector<string>& a_vectNames,                 
00066                       const Box& a_domain,                               
00067                       const Real& a_dx,                                         
00068                       const Real& a_dt,                                         
00069                       const Real& a_time,
00070                       const Vector<int>& a_vectRatio,                           
00071                       const int& a_numLevels);
00072 
00073 
00075 
00094 void
00095 WriteAMRHierarchyHDF5(HDF5Handle& handle,                             
00096                       const Vector<DisjointBoxLayout>& a_vectGrids, 
00097                       const Vector<LevelData<FArrayBox>* > & a_vectData, 
00098                       const Vector<string>& a_vectNames,                 
00099                       const Box& a_domain,                               
00100                       const Real& a_dx,                                         
00101                       const Real& a_dt,                                         
00102                       const Real& a_time,
00103                       const Vector<int>& a_vectRatio,                           
00104                       const int& a_numLevels);
00105 
00106 
00108 
00122 void
00123 WriteAMRHierarchyHDF5(const string& filename,                             
00124                       const Vector<DisjointBoxLayout>& a_vectGrids, 
00125                       const Vector<LevelData<FArrayBox>* > & a_vectData, 
00126                       const Box& a_domain,                               
00127                       const Vector<int>& a_vectRatio,                           
00128                       const int& a_numLevels);
00129 
00130 
00131 
00133 
00147 void
00148 WriteAMRHierarchyHDF5(HDF5Handle& handle, 
00149                       const Vector<DisjointBoxLayout>& a_vectGrids, 
00150                       const Vector<LevelData<FArrayBox>* > & a_vectData, 
00151                       const Box& a_domain,                               
00152                       const Vector<int>& a_vectRatio,                           
00153                       const int& a_numLevels);
00154 
00155 
00156 
00158 
00184 int
00185 ReadAMRHierarchyHDF5(const string& filename,                             
00186                      Vector<DisjointBoxLayout>& a_vectGrids, 
00187                      Vector<LevelData<FArrayBox>* > & a_vectData, 
00188                      Vector<string>& a_vectNames,                 
00189                      Box& a_domain,                               
00190                      Real& a_dx,                                         
00191                      Real& a_dt,                                         
00192                      Real& a_time,                                         
00193                      Vector<int>& a_refRatio,                           
00194                      int& a_numLevels,
00195                      const IntVect& a_ghostVector = IntVect::TheZeroVector());
00196 
00198 
00224 int
00225 ReadAMRHierarchyHDF5(HDF5Handle& handle,
00226                      Vector<DisjointBoxLayout>& a_vectGrids, 
00227                      Vector<LevelData<FArrayBox>* > & a_vectData, 
00228                      Vector<string>& a_vectNames,                 
00229                      Box& a_domain,                               
00230                      Real& a_dx,                                         
00231                      Real& a_dt,                                         
00232                      Real& a_time,                                         
00233                      Vector<int>& a_refRatio,                           
00234                      int& a_numLevels,
00235                      const IntVect& a_ghostVector = IntVect::TheZeroVector());
00236 
00238 
00260 int
00261 ReadAMRHierarchyHDF5(const string& filename,                             
00262                      Vector<DisjointBoxLayout>& a_vectGrids, 
00263                      Vector<LevelData<FArrayBox>* > & a_vectData, 
00264                      Box& a_domain,                               
00265                      Vector<int>& a_refRatio,                           
00266                      int& a_numLevels,
00267                      const IntVect& a_ghostVector = IntVect::TheZeroVector());
00268 
00269 
00271 
00293 int
00294 ReadAMRHierarchyHDF5(HDF5Handle& handle,
00295                      Vector<DisjointBoxLayout>& a_vectGrids, 
00296                      Vector<LevelData<FArrayBox>* > & a_vectData, 
00297                      Box& a_domain,                               
00298                      Vector<int>& a_refRatio,                           
00299                      int& a_numLevels,
00300                      const IntVect& a_ghostVector = IntVect::TheZeroVector());
00301 
00302 
00304 
00308 void
00309 writeFAB(const FArrayBox* a_data);
00310 
00312 
00316 void
00317 writeFABname(const FArrayBox* a_data, const string& a_filename);
00318 
00319 
00321 
00325 void
00326 writeLDF(const LevelData<FArrayBox>* a_data);
00327 
00329 
00333 void
00334 writeLDFname(const LevelData<FArrayBox>* a_data, const string& a_filename);
00335 
00336 
00337 #endif  //HDF5
00338 
00339 //write a fab out in ascii very slowly
00340 extern void 
00341 writeAFabASCII(std::ostream& os, const FArrayBox& fab);
00342 
00343 //read a  fab in, in ascii, very slowly
00344 extern void 
00345 readAFabASCII(istream& is, FArrayBox& fab);
00346 
00347 void writeAFabASCII(std::ostream& os, const FArrayBox& fab);
00348 
00349 void readAFabASCII(istream& is, FArrayBox& fab);
00350 
00352 
00369 void
00370 WriteAMRHierarchyASCII(const string& filename,                             
00371                        const Vector<DisjointBoxLayout>& a_vectGrids, 
00372                        const Vector<LevelData<FArrayBox>* > & a_vectData, 
00373                        const Vector<string>& a_vectNames,                 
00374                        const Box& a_domain,                               
00375                        const Real& a_dx,
00376                        const Real& a_dt,
00377                        const Real& a_time,
00378                        const Vector<int>& a_vectRatio,
00379                        const int& a_numLevels);
00380 
00381 
00383 
00406 int
00407 ReadAMRHierarchyASCII(const string& filename,                             
00408                       Vector<DisjointBoxLayout>& a_vectGrids, 
00409                       Vector<LevelData<FArrayBox>* > & a_vectData, 
00410                       Vector<string>& a_vectNames,                 
00411                       Box& a_domain,                               
00412                       Real& a_dx,                                         
00413                       Real& a_dt,                                         
00414                       Real& a_time,                                         
00415                       Vector<int>& a_vectRatio,                           
00416                       int& a_numLevels,
00417                       const IntVect& ghostVector = IntVect::TheZeroVector());
00418 
00420 
00439 int
00440 ReadEBAMRASCII(const string& filename,                             
00441                Vector<DisjointBoxLayout>& a_vectGrids, 
00442                Vector<LevelData<FArrayBox>* > & a_vectData, 
00443                Vector<string>& a_vectNames,                 
00444                Box& a_domain,                               
00445                Vector<IntVectSet>& a_coveredCells,                               
00446                Vector<IntVectSet>& a_multiValuedCells,                               
00447                Vector<int>& a_refRatio,                           
00448                int& a_numLevels,
00449                const IntVect& a_ghostVector = IntVect::TheZeroVector());
00450 
00451 #endif