CHArray.H File Reference

A multi-dimensional array class for Chombo. More...

#include <iomanip>
#include "CHArray_fwd.H"
#include <cassert>

Include dependency graph for CHArray.H:

Go to the source code of this file.

Classes
class	IntVect
	An integer Vector in SpaceDim-dimensional space. More...
class	Box
	A Rectangular Domain on an Integer Lattice. More...
class	Misc::TypeTr< T >
	Test for class type. More...
struct	Misc::TypeTr< T >::Two
struct	CHRange
	Defines a range of subscripts. More...
struct	ArSp::AllocRawPolicy< T, IsClass >
struct	ArSp::AllocRawPolicy< T, true >
	If elements are class type, allocate using placement new. More...
struct	ArSp::AllocRawPolicy< T, false >
	If element are not class type, just assign the address. More...
struct	ArSp::ReleaseRawPolicy< T, IsClass >
struct	ArSp::ReleaseRawPolicy< T, true >
	If elements are class type, invoke destructor on each element. More...
struct	ArSp::ReleaseRawPolicy< T, false >
	If elements are not class type, do nothing. More...
class	ArSp::DefaultArrayAlloc< T >
	Default allocator. More...
class	ArSp::IndexerData< Rank, DimT >
	Any rank and a zero-based subscript. More...
class	ArSp::IndexerData< Rank, CHRange >
	Any rank and a subscript range. More...
class	ArSp::IndexerData< 1, DimT >
	Rank 1 and a zero-based subscript (no data) More...
class	ArSp::IndexerData< 1, CHRange >
	Rank 1 and a subscript range. More...
class	ArSp::RSIndexer< Rank, DimT >
	Rank > 2 for zero-based subscripts and > 1 for subscript ranges. More...
class	ArSp::RSIndexer< 1, DimT >
	Specialization for Rank 1 (any type of subscript) More...
class	ArSp::RSIndexer< 2, USz_t >
	Full specialization for Rank 2 and zero-based subscripts. More...
class	ArSp::CSIndexer< Rank, DimT >
	Rank > 2 for zero-based subscripts and > 1 for subscript ranges. More...
class	ArSp::CSIndexer< 1, DimT >
	Specialization for Rank 1 (any type of subscript) More...
class	ArSp::CSIndexer< 2, USz_t >
	Full specialization for Rank 2 and zero-based subscripts. More...
struct	ArSp::ArTr< Rank, ArConf >
struct	ArSp::ArTr< Rank, ArZeroRow >
struct	ArSp::ArTr< Rank, ArZeroCol >
struct	ArSp::ArTr< Rank, ArRangeRow >
struct	ArSp::ArTr< Rank, ArRangeCol >
class	CHArray< T, Rank, ArConf, Alloc >
	Multidimensional array class. More...
struct	CHArray< T, Rank, ArConf, Alloc >::Array_impl
class	ArSp::NewArrayAlloc< T >
	Allocator that only permits allocation by new. More...
class	ArSp::ArrayOfVectorAlloc
	Allocator for an array of vectors contiguous in memory. More...
class	ArSp::ArrayOfMatrixAlloc
	Allocator for an array of matrices contiguous in memory. More...

Namespaces
	Misc
	ArSp

Macros
#define	_CHARRAY_H_
#define	CH_assert(cond)   assert(cond)
#define	SpaceDim   2
#define	D_DECL6(a, b, c, d, e, f)   a,b
#define	D_TERM6(a, b, c, d, e, f)   a b
#define	D_DEFIV
#define	D_DEFBOX
#define	D_IXIV

Typedefs
typedef double	Real
typedef CHArray< Real, 1, ArZeroCol, ArSp::DefaultArrayAlloc< Real > >	CHVector
	Vector definition. More...
typedef CHArray< Real, 2, ArZeroCol, ArSp::DefaultArrayAlloc< Real > >	CHMatrix
	Matrix defined with column-ordered storage. More...

Functions
template<typename T >
USz_t	ArSp::sizeOfDim (const T &dim)
	Get the size of a dimension. More...
template<>
USz_t	ArSp::sizeOfDim< CHRange > (const CHRange &dim)
template<typename T , unsigned Rank, int ArConf, typename Alloc >
std::ostream &	operator<< (std::ostream &os, const CHArray< T, Rank, ArConf, Alloc > &A)
	Output of an array. More...
template<>
std::ostream &	operator<< (std::ostream &os, const CHMatrix &M)
	Pretty output of a matrix (should be in .cpp) More...
Support for describing dimensions by a range of subscripts
ArSp::USz_t	operator* (const CHRange &a, const CHRange &b)
	Multiply two dimensions. More...
ArSp::USz_t	operator* (const ArSp::USz_t &i, const CHRange &a)
ArSp::USz_t	operator* (const CHRange &a, const ArSp::USz_t &i)

Detailed Description

A multi-dimensional array class for Chombo.

Macro Definition Documentation

_CHARRAY_H_

#define _CHARRAY_H_

CH_assert

#define CH_assert

(

cond

)

assert(cond)

Referenced by List< T >::addAfter(), List< T >::addBefore(), MGLevelOp< LevelData< NodeFArrayBox > >::addCoarserObserver(), AMRMultiGrid< LevelData< T > >::addInspector(), ComputeCutCellMoments< dim >::addMomentMaps(), RK4DenseOutput< Soln, Rhs, EXOP >::advance(), ARK4DenseOutput< Soln, Rhs, IMEXOp >::advance(), ARK4< X, FI, FE, dX >::advance(), IFid::aggregate(), ArSp::DefaultArrayAlloc< T >::allocate(), ArSp::NewArrayAlloc< T >::allocate(), ArSp::ArrayOfVectorAlloc::allocate(), ArSp::ArrayOfMatrixAlloc::allocate(), AMRMultiGrid< LevelData< T > >::AMRVCycle(), MultilevelLinearOp< T >::assign(), BaseEBCellFAB< Real >::assign(), BASISV(), BASISV_TM(), BoundaryIterator::box(), BoxLayoutData< BaseFab< int > >::BoxLayoutData(), RootSolver::Brent(), CHRange::CHRange(), GraphNode::clear(), IndexTM< Real, GLOBALDIM >::coarsen(), IntVect::coarsen(), coarsen(), AMRMultiGrid< LevelData< T > >::computeAMROperator(), AMRMultiGrid< LevelData< T > >::computeAMRResidualLevel(), ComputeCutCellMoments< dim >::computeMoments(), MinimalCCCM< dim >::computeMomentsRecursively(), Box::contains(), Box::convert(), IVSFAB< T >::copy(), BaseIFFAB< FaceStencil >::copy(), MiniIFFAB< Real >::copy(), BaseIVFAB< Real >::copy(), BaseEBCellFAB< Real >::copy(), CodimBox< S >::copy(), BaseEBFaceFAB< Real >::copy(), BaseFab< Real >::copy(), LevelData< BaseFab< int > >::copyTo(), AliasDataFactory< T >::create(), PetscSolver< LevelData< FArrayBox > >::create_mat_vec(), GMRESSolver< T >::CycleGMRES(), IVSFAB< T >::dataPtr(), BaseIFFAB< FaceStencil >::dataPtr(), MiniIFFAB< Real >::dataPtr(), BaseIVFAB< Real >::dataPtr(), BaseFab< Real >::dataPtr(), CoDimCopyManager< T >::define(), MultilevelLinearOp< T >::define(), LayoutData< Vector< IntVectSet > >::define(), BaseIFFAB< FaceStencil >::define(), PetscSolver< LevelData< FArrayBox > >::define(), MiniIVFAB< Real >::define(), LevelData< BaseFab< int > >::define(), CodimBox< S >::define(), MiniIFFAB< Real >::define(), BaseIVFAB< Real >::define(), BaseEBCellFAB< Real >::define(), BaseEBFaceFAB< Real >::define(), IVSFAB< T >::define(), BoxLayoutData< BaseFab< int > >::define(), BaseFab< Real >::define(), RK4DenseOutput< Soln, Rhs, EXOP >::denseOutputCoefs(), ARK4DenseOutput< Soln, Rhs, IMEXOp >::denseOutputCoefs(), BaseIF::derivative(), BaseEBFaceFAB< Real >::direction(), MultilevelLinearOp< T >::dotProduct(), EBNormalizeByVolumeFraction::EBNormalizeByVolumeFraction(), factorial(), TupleKeyMap< TupleTypenames, ValueT >::fetch(), BaseEBCellFAB< Real >::fill(), List< T >::firstElement(), EBPatchAdvect::floorPrimitives(), FortranArrayIndex(), BoxLayoutData< BaseFab< int > >::generalCopyTo(), BoxLayout::get(), BaseEBFaceFAB< Real >::getCellRegion(), EBLevelGrid::getCFIVS(), QuadCFStencil::getCoarIVS(), LevelFluxRegister::getCoarseLocations(), EBLevelGrid::getCoveringIVS(), EBLevelGrid::getDBL(), CodimBox< S >::getDirection(), CodimBox< S >::getDirections(), EBLevelGrid::getDomain(), EBLevelGrid::getEBIS(), EBLevelGrid::getEBISL(), QuadCFStencil::getFineIVS(), EBLevelGrid::getGhost(), MiniIVFAB< Real >::getIndex(), IVSFAB< T >::getIndex(), MiniIFFAB< Real >::getIndex(), BaseIVFAB< Real >::getIndex(), BaseIFFAB< FaceStencil >::getLocalVecIndex(), EBLevelGrid::getMaxCoarseningRatio(), EBLevelGrid::getMaxRefinementRatio(), BaseEBCellFAB< Real >::getMultiCells(), BaseEBCellFAB< Real >::getMultiValuedFAB(), BaseEBFaceFAB< Real >::getMultiValuedFAB(), CodimBox< S >::getNumOrient(), getOffsets(), BaseEBCellFAB< Real >::getRegion(), BaseEBFaceFAB< Real >::getRegion(), CodimBox< S >::getSequential(), BaseEBFaceFAB< Real >::getSingleValuedFAB(), BaseEBCellFAB< Real >::getSingleValuedFAB(), PolyGeom::getTangentVectors(), BaseFab< Real >::getVal(), EBFluxRegister::incrementCoarse(), EBFluxRegister::incrementFine(), GraphNodeImplem::index(), IndexedMoments< SpaceDim, CH_EBIS_ORDER >::indexOf(), TupleKeyMap< TupleTypenames, ValueT >::insert(), IndexTM< Real, GLOBALDIM >::integer_factorial(), BaseFab< Real >::interval(), IntVect::IntVect(), ipow(), CFIVS::isEmpty(), QuadCFStencil::isEmpty(), CFIVS::isPacked(), ArSp::RSIndexer< Rank, DimT >::ixIndex1D(), ArSp::RSIndexer< 1, DimT >::ixIndex1D(), ArSp::RSIndexer< 2, USz_t >::ixIndex1D(), ArSp::CSIndexer< Rank, DimT >::ixIndex1D(), ArSp::CSIndexer< 1, DimT >::ixIndex1D(), ArSp::CSIndexer< 2, USz_t >::ixIndex1D(), List< T >::lastElement(), LayoutData< Vector< IntVectSet > >::LayoutData(), BaseIVFAB< Real >::linearIn(), IVSFAB< T >::linearIn(), BaseIFFAB< FaceStencil >::linearIn(), MiniIFFAB< Real >::linearIn(), CodimBox< S >::linearIn(), linearOut(), BaseIVFAB< Real >::linearOut(), BaseIFFAB< FaceStencil >::linearOut(), MiniIFFAB< Real >::linearOut(), IVSFAB< T >::linearOut(), CodimBox< S >::linearOut(), LevelData< BaseFab< int > >::localCopyTo(), CHArray< T, Rank, ArConf, Alloc >::lowerBound(), NormalDerivativeNew< dim >::nChoosek(), nCk(), BaseEBCellFAB< Real >::nComp(), BaseEBFaceFAB< Real >::nComp(), BaseFab< Real >::nCompPtr(), MGLevelOp< LevelData< NodeFArrayBox > >::notifyObserversOfChange(), BaseFab< Real >::offset(), NeighborIterator::ok(), FASMultiGrid< T >::oneCycle(), LDaddNodeOp< T >::op(), NeighborIterator::operator()(), LayoutIterator::operator()(), ShiftIterator::operator()(), ListIterator< T >::operator()(), Scheduler::PeriodicFunctionLessThan::operator()(), BoxIterator::operator()(), IVSFAB< T >::operator()(), CodimBox< S >::operator()(), BaseIFFAB< FaceStencil >::operator()(), MiniIFFAB< Real >::operator()(), BaseEBCellFAB< Real >::operator()(), BaseIVFAB< Real >::operator()(), BaseEBFaceFAB< Real >::operator()(), BaseFab< Real >::operator()(), BCFuncWrapper::operator()(), CopyIterator::operator()(), CHArray< T, Rank, ArConf, Alloc >::operator()(), ListIterator< T >::operator*(), DenseIntVectSetIterator::operator++(), operator<<(), RefCountedPtr< DataFactory< NodeFArrayBox > >::operator=(), CHArray< T, Rank, ArConf, Alloc >::operator=(), IFidTable::operator[](), Tuple< EBFaceFAB *, CH_SPACEDIM >::operator[](), LayoutData< Vector< IntVectSet > >::operator[](), BitSet::operator[](), RealVect::operator[](), IndexTM< Real, GLOBALDIM >::operator[](), BoxLayout::operator[](), Vector< LevelTGAHelmOp< LevelData< EBCellFAB >, EBFluxFAB > * >::operator[](), RefCountedPtr< DataFactory< NodeFArrayBox > >::operator[](), List< T >::operator[](), CopyIterator::operator[](), CodimBox< S >::orientBox(), CFIVS::packedBox(), BaseFab< Real >::performCopy(), BaseFab< Real >::performSetVal(), pfactorial(), MultilevelLinearOp< T >::preCond(), BoxLayout::procID(), read(), RefCountedPtr< DataFactory< NodeFArrayBox > >::RefCountedPtr(), IndexTM< Real, GLOBALDIM >::reflect(), IntVect::reflect(), reflect(), EBFastFR::reflux(), AMRMultiGrid< LevelData< T > >::relaxOnlyHomogeneous(), List< T >::removeLink(), List< T >::replace(), RK4DenseOutput< Soln, Rhs, EXOP >::resetDt(), ARK4DenseOutput< Soln, Rhs, IMEXOp >::resetDt(), ARK4< X, FI, FE, dX >::resetDt(), MultilevelLinearOp< T >::residual(), GMRESSolver< T >::ResidualGMRES(), Box::sameSize(), CodimBox< S >::seq2bit(), Box::setBig(), AMRMultiGrid< LevelData< T > >::setBottomSolverEpsCushion(), BaseEBCellFAB< Real >::setCoveredCellVal(), BaseEBFaceFAB< Real >::setCoveredFaceVal(), EBLevelGrid::setMaxCoarseningRatio(), EBLevelGrid::setMaxRefinementRatio(), PetscSolver< LevelData< FArrayBox > >::setNull(), MGLevelOpObserver< LevelData< NodeFArrayBox > >::setObservee(), BitSetIterator::setpos(), BoxLayout::setProcID(), Box::setRange(), IndexedMoments< SpaceDim, CH_EBIS_ORDER >::setRegular(), GMRESSolver< T >::setRestartLen(), IndexedMoments< SpaceDim, CH_EBIS_ORDER >::setSize(), Box::setSmall(), PetscSolver< LevelData< FArrayBox > >::setup_solver(), IVSFAB< T >::setVal(), BaseIFFAB< FaceStencil >::setVal(), MiniIFFAB< Real >::setVal(), BaseIVFAB< Real >::setVal(), IntVect::setVal(), BaseEBCellFAB< Real >::setVal(), IndexTM< Real, GLOBALDIM >::setVal(), IndexTM< Real, GLOBALDIM >::shift(), BaseFab< Real >::shift(), IntVect::shift(), BaseFab< Real >::shiftHalf(), SimpleEllipsoidIF::SimpleEllipsoidIF(), BaseIVFAB< Real >::size(), BaseIFFAB< FaceStencil >::size(), MiniIFFAB< Real >::size(), CHArray< T, Rank, ArConf, Alloc >::size(), BiCGStabSolver< LevelData< T > >::solve(), RelaxSolver< T >::solve(), PetscSolver< LevelData< FArrayBox > >::solve_mfree_private(), PetscSolver< LevelData< FArrayBox > >::solve_private(), AMRFASMultiGrid< T >::solveNoInit(), AMRMultiGrid< LevelData< T > >::solveNoInitResid(), RK4DenseOutput< Soln, Rhs, EXOP >::start0end1(), ARK4DenseOutput< Soln, Rhs, IMEXOp >::start0end1(), BaseLevelHeatSolver< LevelData< FArrayBox >, FluxBox, LevelFluxRegister >::timeInterp(), CHArray< T, Rank, ArConf, Alloc >::totalOffset(), List< T >::transfer(), IndicesTransformation::transform(), BaseFab< Real >::undefine(), CHArray< T, Rank, ArConf, Alloc >::undefine(), BoxLayoutData< BaseFab< int > >::unpackReceivesToMe_append(), BaseLevelCrankNicolson< LevelData< EBCellFAB >, EBFluxFAB, EBFluxRegister >::updateSoln(), BaseLevelBackwardEuler< LevelData< FArrayBox >, FluxBox, LevelFluxRegister >::updateSoln(), BaseLevelTGA< LevelData< FArrayBox >, FluxBox, LevelFluxRegister >::updateSolnWithTimeDependentOp(), BaseLevelTGA< LevelData< FArrayBox >, FluxBox, LevelFluxRegister >::updateSolnWithTimeIndependentOp(), CHArray< T, Rank, ArConf, Alloc >::upperBound(), ListIterator< T >::value(), BaseIF::value(), VarCoefStencil::weight(), VoFStencil::weight(), write(), WriteMultiData< T >::writeData(), and WriteMultiData< T >::WriteMultiData().

SpaceDim

#define SpaceDim   2

Referenced by ArSp::RSIndexer< Rank, DimT >::ixIV(), ArSp::RSIndexer< 1, DimT >::ixIV(), ArSp::RSIndexer< 2, USz_t >::ixIV(), and IntVect::product().

D_DECL6

#define D_DECL6	(		a,
			b,
			c,
			d,
			e,
			f
	)		a,b

Referenced by absolute(), coarsen(), diagShift(), IntVect::IntVect(), IndexType::ixType(), IntVect::operator*(), operator*(), IntVect::operator+(), operator+(), IntVect::operator-(), RealVect::operator-(), operator-(), IntVect::operator/(), scale(), and Box::size().

D_TERM6

#define D_TERM6	(		a,
			b,
			c,
			d,
			e,
			f
	)		a b

Referenced by ProblemDomain::contains(), ProblemDomain::image(), IndexType::IndexType(), IntVect::IntVect(), Box::isEmpty(), ProblemDomain::isPeriodic(), EBISLevel::match(), IntVect::operator!=(), RealVect::operator<(), IntVect::operator<(), RealVect::operator<=(), IntVect::operator<=(), IndexType::operator=(), IntVect::operator==(), RealVect::operator>(), IntVect::operator>(), RealVect::operator>=(), IntVect::operator>=(), RealVect::product(), Box::sameSize(), DenseIntVectSetIterator::setStride(), IntVect::sum(), RealVect::sum(), and WriteMultiData< T >::writeData().

D_DEFIV

#define D_DEFIV

Value:

D_DECL6(DimT(iv[Indexer::ixIV(0)]), \
                         DimT(iv[Indexer::ixIV(1)]), \
                         DimT(iv[Indexer::ixIV(2)]), \
                         DimT(iv[Indexer::ixIV(3)]), \
                         DimT(iv[Indexer::ixIV(4)]), \
                         DimT(iv[Indexer::ixIV(5)]))

Referenced by CHArray< T, Rank, ArConf, Alloc >::define().

D_DEFBOX

#define D_DEFBOX

Value:

D_DECL6(DimT(box.smallEnd(Indexer::ixIV(0)), \
                                 box.bigEnd(Indexer::ixIV(0))), \
                          DimT(box.smallEnd(Indexer::ixIV(1)), \
                                 box.bigEnd(Indexer::ixIV(1))), \
                          DimT(box.smallEnd(Indexer::ixIV(2)), \
                                 box.bigEnd(Indexer::ixIV(2))), \
                          DimT(box.smallEnd(Indexer::ixIV(3)), \
                                 box.bigEnd(Indexer::ixIV(3))), \
                          DimT(box.smallEnd(Indexer::ixIV(4)), \
                                 box.bigEnd(Indexer::ixIV(4))), \
                          DimT(box.smallEnd(Indexer::ixIV(5)), \
                                 box.bigEnd(Indexer::ixIV(5))))

Referenced by CHArray< T, Rank, ArConf, Alloc >::define().

D_IXIV

#define D_IXIV

Value:

D_DECL6(iv[Indexer::ixIV(0)], \
                        iv[Indexer::ixIV(1)], \
                        iv[Indexer::ixIV(2)], \
                        iv[Indexer::ixIV(3)], \
                        iv[Indexer::ixIV(4)], \
                        iv[Indexer::ixIV(5)])

Referenced by CHArray< T, Rank, ArConf, Alloc >::operator()().

Typedef Documentation

Real

typedef double Real

CHVector

typedef CHArray<Real, 1, ArZeroCol, ArSp::DefaultArrayAlloc<Real> > CHVector

Vector definition.

CHMatrix

typedef CHArray<Real, 2, ArZeroCol, ArSp::DefaultArrayAlloc<Real> > CHMatrix

Matrix defined with column-ordered storage.

Function Documentation

operator*() [1/3]

ArSp::USz_t operator* ( const CHRange &  a, const CHRange &  b  )

inline

Multiply two dimensions.

References ArSp::sizeOfDim().

operator*() [2/3]

ArSp::USz_t operator* ( const ArSp::USz_t &  i, const CHRange &  a  )

inline

References ArSp::sizeOfDim().

operator*() [3/3]

ArSp::USz_t operator* ( const CHRange &  a, const ArSp::USz_t &  i  )

inline

References ArSp::sizeOfDim().

operator<<() [1/2]

template<typename T , unsigned Rank, int ArConf, typename Alloc >

std::ostream& operator<<	(	std::ostream &	os,
		const CHArray< T, Rank, ArConf, Alloc > &	A
	)

Output of an array.

References CHArray< T, Rank, ArConf, Alloc >::begin(), CH_assert, CHArray< T, Rank, ArConf, Alloc >::end(), CHArray< T, Rank, ArConf, Alloc >::isAllocated(), and IntVect::p().

operator<<() [2/2]

template<>

std::ostream& operator<< ( std::ostream &  os, const CHMatrix &  M  )

inline

Pretty output of a matrix (should be in .cpp)

References CH_assert, CHArray< T, Rank, ArConf, Alloc >::isAllocated(), M, and CHArray< T, Rank, ArConf, Alloc >::size().