UnstructuredIO Namespace Reference

Functions
void	BStoUS (UnstructuredData &a_usData, const Vector< LevelData< FArrayBox > *> &a_bsData, const Vector< int > &a_ratio, bool a_validOnly)
	populate a UnstructuredData from a Vector<LevelData<FArrayBox>*> More...
void	USToBS (Vector< LevelData< FArrayBox > *> &a_bsdata, const UnstructuredData &a_usData)
	build block structed data from valid data More...
int	defineCFDimension (int a_ncID, size_t a_len, const std::string &a_name)
int	defineCFVar (int a_ncID, int a_nDim, int *a_dimID, nc_type a_type, const std::string &a_name, const std::string &a_unit, const std::string &a_stdName, const std::string &a_longName)
void	readCFVar (int a_ncID, const std::string &a_name, Vector< int > &a_data)
void	readCFVar (int a_ncID, int a_varID, Vector< int > &a_data)
void	readCFVar (int a_ncID, const std::string &a_name, Vector< Real > &a_data)
void	readCFVar (int a_ncID, int a_varID, Vector< Real > &a_data)
void	writeCFVar (int a_ncID, const std::string &a_name, const Vector< int > &a_data)
void	writeCFVar (int a_ncID, const std::string &a_name, const Vector< Real > &a_data)
void	writeCF (const std::string &, const UnstructuredData &, const Vector< std::string > &, const std::string &, const Transformation &)
	write UnstructuredData to a NetCDF-CF file More...
void	readCF (UnstructuredData &, Vector< std::string > &, const std::string &)
	read UnstructuredData from a NetCDF-CF file More...

Function Documentation

BStoUS()

void UnstructuredIO::BStoUS	(	UnstructuredData &	a_usData,
		const Vector< LevelData< FArrayBox > *> &	a_bsData,
		const Vector< int > &	a_ratio,
		bool	a_validOnly
	)

populate a UnstructuredData from a Vector<LevelData<FArrayBox>*>

References UnstructuredData::append(), and UnstructuredData::iv().

Referenced by AMRtoCF(), and USToBS().

defineCFDimension()

int UnstructuredIO::defineCFDimension	(	int	a_ncID,
		size_t	a_len,
		const std::string &	a_name
	)

References defineCFVar().

Referenced by writeCF().

defineCFVar()

int UnstructuredIO::defineCFVar	(	int	a_ncID,
		int	a_nDim,
		int *	a_dimID,
		nc_type	a_type,
		const std::string &	a_name,
		const std::string &	a_unit,
		const std::string &	a_stdName,
		const std::string &	a_longName
	)

References readCFVar().

Referenced by defineCFDimension(), and writeCF().

readCF()

void UnstructuredIO::readCF	(	UnstructuredData &	a_usData,
		Vector< std::string > &	a_names,
		const std::string &	a_file
	)

read UnstructuredData from a NetCDF-CF file

read unstructureddata from a NetCDF-CF compliant file along with the mesh data needed to reconstruct a Chombo AMR hierarchy from it

References FieldNames::CFLookup(), UnstructuredData::define(), UnstructuredData::dx(), UnstructuredData::field(), UnstructuredData::iv(), UnstructuredData::level(), UnstructuredData::levelBoxSet(), UnstructuredData::nCell(), UnstructuredData::nLevel(), UnstructuredData::ratio(), readCFVar(), UnstructuredData::resize(), and UnstructuredData::time().

Referenced by CFtoAMR().

readCFVar() [1/4]

void UnstructuredIO::readCFVar	(	int	a_ncID,
		const std::string &	a_name,
		Vector< int > &	a_data
	)

Referenced by defineCFVar(), readCF(), and readCFVar().

readCFVar() [2/4]

void UnstructuredIO::readCFVar	(	int	a_ncID,
		int	a_varID,
		Vector< int > &	a_data
	)

References readCFVar().

readCFVar() [3/4]

void UnstructuredIO::readCFVar	(	int	a_ncID,
		const std::string &	a_name,
		Vector< Real > &	a_data
	)

References readCFVar().

readCFVar() [4/4]

void UnstructuredIO::readCFVar	(	int	a_ncID,
		int	a_varID,
		Vector< Real > &	a_data
	)

References writeCFVar().

USToBS()

void UnstructuredIO::USToBS	(	Vector< LevelData< FArrayBox > *> &	a_bsdata,
		const UnstructuredData &	a_usData
	)

build block structed data from valid data

References BStoUS(), UnstructuredData::domain(), UnstructuredData::field(), UnstructuredData::iv(), UnstructuredData::level(), UnstructuredData::levelBoxSet(), UnstructuredData::nCell(), UnstructuredData::nComp(), UnstructuredData::nLevel(), and UnstructuredData::ratio().

Referenced by CFtoAMR(), and UnstructuredData::computeNodeCoord().

writeCF()

void UnstructuredIO::writeCF	(	const std::string &	a_file,
		const UnstructuredData &	a_usData,
		const Vector< std::string > &	a_names,
		const std::string &	a_created,
		const Transformation &	a_latlonTransformation
	)

write UnstructuredData to a NetCDF-CF file

write unstructured data to a NetCDF-CF compliant file, along with the mesh data needed to reconstruct a Chombo AMR hierarchy from it

References FieldNames::CFLookup(), UnstructuredData::computeNodeCoord(), defineCFDimension(), defineCFVar(), UnstructuredData::domain(), UnstructuredData::dx(), UnstructuredData::field(), UnstructuredData::iv(), UnstructuredData::level(), UnstructuredData::levelBoxSet(), UnstructuredData::nCell(), UnstructuredData::nComp(), UnstructuredData::nLevel(), UnstructuredData::ratio(), Transformation::transform(), writeCFVar(), and UnstructuredData::x().

Referenced by AMRtoCF().

writeCFVar() [1/2]

void UnstructuredIO::writeCFVar	(	int	a_ncID,
		const std::string &	a_name,
		const Vector< int > &	a_data
	)

Referenced by readCFVar(), and writeCF().

writeCFVar() [2/2]

void UnstructuredIO::writeCFVar	(	int	a_ncID,
		const std::string &	a_name,
		const Vector< Real > &	a_data
	)