11 #ifndef _VISCOUSTENSOROP_H_    12 #define _VISCOUSTENSOROP_H_    27 #include "NamespaceHeader.H"    29 #define VTOP_DEFAULT_SAFETY 0.9    64         for (
int idir = 0; idir < 
SpaceDim; idir++)
    66             int isrc = 0; 
int idst = idir; 
int inco = 1;
    67             a_rhs[dit()].mult((*
m_acoef)[dit()], isrc, idst, inco);
    77         for (
int idir = 0; idir < 
SpaceDim; idir++)
    79             int isrc = 0; 
int idst = idir; 
int inco = 1;
    80             a_rhs[dit()].divide((*
m_acoef)[dit()], isrc, idst, inco);
   113                   const Real&                                 a_dxLevel,
   114                   const Real&                                 a_dxCoar,
   117                   Real                                        a_relaxTolerance = 0.0,
   118                   int                                         a_relaxMinIter = 1000
   135                   const Real&                                 a_dxLevel,
   136                   const Real&                                 a_dxCoar,
   139                   Real                                        a_relaxTolerance = 0.0,
   140                   int                                         a_relaxMinIter = 1000
   157               const Real&                                 a_dxLevel,
   158               const Real&                                 a_dxCoar,
   161               Real                                        a_relaxTolerance = 0.0,
   162               int                                         a_relaxMinIter = 1000
   168                           bool a_homogeneous = 
false);
   174                                     bool a_homogeneous = 
false);  
   181                           bool a_homogeneous = 
false);
   186                                     bool a_homogeneous = 
false);
   192                                    const int& a_refRat);
   208     for (
int idir = 0; idir < 
SpaceDim; idir++)
   210         const FArrayBox& etaFace     =    (*m_eta)[a_dit][idir];
   211         const FArrayBox& lambdaFace  = (*m_lambda)[a_dit][idir];
   213         Box faceBox = a_flux[idir].
box();
   215         faceBox &= domFaceBox;
   216         getFlux(a_flux[idir], data, gradData, etaFace, lambdaFace, faceBox, idir, 1);
   217         a_flux[idir] *= a_scale;
   232                const Box&       a_facebox,
   313                            bool a_homogeneousPhysBC,
   322                              bool a_homogeneousPhysBC,
   330                              bool a_homogeneousPhysBC);
   342                            bool a_skip_res = 
false );
   365     string fname(a_name);
   366     fname.append(
".hdf5");
   414                          bool a_homogeneousDomBC,
   420                            bool a_homogeneousBC);
   425                                    bool a_homogeneousBC,
   454                                 const Box&             a_faceBox,
   455                                 const int&             a_faceDir,
   463                                     const Box&       a_faceBox,
   565     for (
int ivec = 0; ivec < 
m_eta.size(); ivec++)
   583                          const Real&                                          a_dxCoar,
   586                          Real                                                 a_relaxTolerance = 0.0,
   587                          int                                                  a_relaxMinIter = 1000
   598                          const Real&                                          a_dxCoar,
   601                          Real                                                 a_relaxTolerance = 0.0,
   602                          int                                                  a_relaxMinIter = 1000
   613                       const Real&                                          a_dxCoar,
   616                       Real                                                 a_relaxTolerance = 0.0,
   617                       int                                                  a_relaxMinIter = 1000
   624           bool homoOnly = 
true);
   678              const int &                   a_refToDepth);
   680 #include "NamespaceFooter.H" int m_ncomp
Definition: ViscousTensorOp.H:510
 
virtual void create(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_rhs)
 
RefCountedPtr< LevelData< FArrayBox > > getACoef() const
Definition: ViscousTensorOp.H:493
 
ProblemDomain m_domain
Definition: ViscousTensorOp.H:513
 
Real m_alpha
Definition: ViscousTensorOp.H:503
 
void reflux(const LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_phi, LevelData< FArrayBox > &residual, AMRLevelOp< LevelData< FArrayBox > > *a_finerOp)
 
virtual void residual(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_rhs, bool a_homogeneous=false)
 
Real m_dxCrse
Definition: ViscousTensorOp.H:512
 
Definition: ViscousTensorOp.H:42
 
void computeOperatorNoBCs(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_phi)
utility function which computes operator after all bc's have been set 
 
A reference-counting handle class. 
Definition: RefCountedPtr.H:173
 
LevelData< FArrayBox > m_relaxCoef
Definition: ViscousTensorOp.H:516
 
void fillGradNoExchange(const LevelData< FArrayBox > &a_phiFine)
optimized version of fillGrad which doesn't call exchange on phi 
 
An irregular domain on an integer lattice. 
Definition: IntVectSet.H:44
 
virtual ~ViscousTensorOp()
Definition: ViscousTensorOp.H:88
 
virtual Real dxCrse() const
Definition: ViscousTensorOp.H:261
 
ViscousTensorOp()
weak construction is bad 
Definition: ViscousTensorOp.H:539
 
Real m_beta
Definition: ViscousTensorOp.H:504
 
A class to facilitate interaction with physical boundary conditions. 
Definition: ProblemDomain.H:141
 
void homogeneousCFInterpTanGrad(LevelData< FArrayBox > &a_tanGrad, const LevelData< FArrayBox > &a_phi, const DataIndex &a_datInd, int a_idir, Side::LoHiSide a_hiorlo)
 
LayoutData< TensorFineStencilSet > m_hiTanStencilSets[SpaceDim]
Definition: ViscousTensorOp.H:533
 
virtual void applyOp(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_phi, bool a_homogeneous=false)
 
virtual void incr(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_x, Real a_scale)
 
void AMROperatorNF(LevelData< FArrayBox > &a_LofPhi, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_phiCoarse, bool a_homogeneousBC)
 
virtual void relax(LevelData< FArrayBox > &a_e, const LevelData< FArrayBox > &a_residual, int iterations)
 
LevelData< FArrayBox > m_grad
Definition: ViscousTensorOp.H:525
 
one dimensional dynamic array 
Definition: Vector.H:53
 
void coarsenStuff(LevelData< FluxBox > &a_etaCoar, LevelData< FluxBox > &a_lambdaCoar, const LevelData< FluxBox > &a_etaFine, const LevelData< FluxBox > &a_lambdaFine, const int &a_refToDepth)
 
BCHolder m_bc
Definition: ViscousTensorOp.H:507
 
Vector< DisjointBoxLayout > m_boxes
Definition: ViscousTensorOp.H:645
 
A strange but true thing to make copying from one boxlayoutdata to another fast. 
Definition: Copier.H:145
 
void define(const DisjointBoxLayout &a_grids, const DisjointBoxLayout &a_gridsFine, const DisjointBoxLayout &a_gridsCoar, const RefCountedPtr< LevelData< FluxBox > > &a_eta, const RefCountedPtr< LevelData< FluxBox > > &a_lambda, const RefCountedPtr< LevelData< FArrayBox > > &a_acoef, Real a_alpha, Real a_beta, int a_refToFine, int a_refToCoar, const ProblemDomain &a_domain, const Real &a_dxLevel, const Real &a_dxCoar, BCHolder &a_bc, Real a_safety=VTOP_DEFAULT_SAFETY, Real a_relaxTolerance=0.0, int a_relaxMinIter=1000)
 
Definition: ViscousTensorOp.H:35
 
static int s_coefficientAverageType
Definition: ViscousTensorOp.H:636
 
RefCountedPtr< LevelData< FluxBox > > m_lambda
Definition: ViscousTensorOp.H:501
 
static void getFluxFromDivAndGrad(FArrayBox &a_flux, const FArrayBox &a_faceDiv, const FArrayBox &a_faceGrad, const FArrayBox &a_etaFace, const FArrayBox &a_lambdaFace, const Box &a_faceBox, int a_dir)
 
Real getBeta() const
Definition: ViscousTensorOp.H:495
 
Quadratic coarse-fine interpolation utility for tensors. 
Definition: TensorCFInterp.H:36
 
virtual bool ok() const
return true if this iterator is still in its Layout 
Definition: LayoutIterator.H:117
 
virtual void axby(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_x, const LevelData< FArrayBox > &a_y, Real a, Real b)
 
Definition: DataIterator.H:190
 
virtual void getFlux(FluxBox &a_flux, const LevelData< FArrayBox > &a_data, const Box &a_grid, const DataIndex &a_dit, Real a_scale)
Definition: ViscousTensorOp.H:200
 
void fillGrad(const LevelData< FArrayBox > &a_phiFine)
These functions are part of the LevelTGA interface...... 
 
LayoutData< CFIVS > m_loCFIVS[SpaceDim]
Definition: ViscousTensorOp.H:530
 
LevelDataOps< FArrayBox > m_levelOps
Definition: ViscousTensorOp.H:526
 
virtual void diagonalScale(LevelData< FArrayBox > &a_rhs, bool a_kappaWeighted)
Definition: ViscousTensorOp.H:46
 
Real m_beta
Definition: ViscousTensorOp.H:651
 
BCHolder m_bc
Definition: ViscousTensorOp.H:649
 
void(* BCFunc)(FArrayBox &a_state, const Box &a_valid, const ProblemDomain &a_domain, Real a_dx, bool a_homogeneous)
Definition: BCFunc.H:30
 
void divergenceCC(LevelData< FArrayBox > &a_div, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > *a_phiC)
take cell centered divergence of the inputs. 
 
virtual Real dx() const
Definition: ViscousTensorOp.H:256
 
const int SpaceDim
Definition: SPACE.H:38
 
Definition: AMRMultiGrid.H:39
 
virtual void outputLevel(LevelData< FArrayBox > &a_rhs, string &a_name)
Definition: ViscousTensorOp.H:362
 
virtual void setToZero(LevelData< FArrayBox > &a_x)
 
virtual void createCoarser(LevelData< FArrayBox > &a_coarse, const LevelData< FArrayBox > &a_fine, bool ghosted)
 
void operator=(const ViscousTensorOp &a_opin)
Definition: ViscousTensorOp.H:548
 
Definition: ViscousTensorOp.H:41
 
static void loHiCenterFace(Box &a_loBox, int &a_hasLo, Box &a_hiBox, int &a_hasHi, Box &a_centerBox, const ProblemDomain &a_eblg, const Box &a_inBox, const int &a_dir)
 
Vector< RefCountedPtr< LevelData< FArrayBox > > > m_acoef
Definition: ViscousTensorOp.H:642
 
A FArrayBox-like container for face-centered fluxes. 
Definition: FluxBox.H:22
 
void cellGrad(FArrayBox &a_gradPhi, const FArrayBox &a_phi, const Box &a_grid)
 
void applyOpNoBoundary(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_phi)
Definition: ViscousTensorOp.H:220
 
virtual void AMRResidualNF(LevelData< FArrayBox > &a_residual, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_phiCoarse, const LevelData< FArrayBox > &a_rhs, bool a_homogeneousPhysBC)
 
virtual void restrictResidual(LevelData< FArrayBox > &a_resCoarse, LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_rhsFine)
 
Vector< ProblemDomain > m_domains
Definition: ViscousTensorOp.H:644
 
#define VTOP_DEFAULT_SAFETY
Definition: ViscousTensorOp.H:29
 
virtual void diagonalScale(LevelData< FArrayBox > &a_rhs)
Definition: ViscousTensorOp.H:59
 
Real m_alpha
Definition: ViscousTensorOp.H:650
 
prolongationType
Definition: ViscousTensorOp.H:39
 
virtual int refToCoarser()
Definition: ViscousTensorOp.H:302
 
virtual void divideByIdentityCoef(LevelData< FArrayBox > &a_rhs)
Definition: ViscousTensorOp.H:72
 
virtual void outputAMR(Vector< LevelData< FArrayBox > * > &a_rhs, string &a_name)
Definition: ViscousTensorOp.H:373
 
int m_refToCoar
Definition: ViscousTensorOp.H:505
 
Real m_dx
Definition: ViscousTensorOp.H:511
 
RefCountedPtr< LevelData< FluxBox > > getLambda() const
Definition: ViscousTensorOp.H:492
 
double Real
Definition: REAL.H:33
 
Box surroundingNodes(const Box &b, int dir)
Definition: Box.H:2145
 
LayoutData< TensorFineStencilSet > m_loTanStencilSets[SpaceDim]
Definition: ViscousTensorOp.H:534
 
Definition: ViscousTensorOp.H:559
 
Real m_relaxTolerance
Definition: ViscousTensorOp.H:653
 
ViscousTensorOp(const ViscousTensorOp &a_opin)
Definition: ViscousTensorOp.H:544
 
virtual void setAlphaAndBeta(const Real &a_alpha, const Real &a_beta)
Definition: ViscousTensorOp.H:51
 
static bool s_lazy_gsrb
if true, only do exchange once per GSRB pass, rather than for each color 
Definition: ViscousTensorOp.H:487
 
A BoxLayout that has a concept of disjointedness. 
Definition: DisjointBoxLayout.H:30
 
virtual void assign(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_rhs)
 
LoHiSide
Definition: LoHiSide.H:27
 
void interpOnIVSHomo(LevelData< FArrayBox > &a_phif, const DataIndex &a_datInd, const int a_idir, const Side::LoHiSide a_hiorlo, const IntVectSet &a_interpIVS)
 
Copier m_exchangeCopier
Definition: ViscousTensorOp.H:527
 
virtual void residualNoExchange(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_rhs, bool a_homogeneous=false)
 
void homogeneousCFInterpPhi(LevelData< FArrayBox > &a_phif, const DataIndex &a_datInd, int a_idir, Side::LoHiSide a_hiorlo)
 
static void Error(const char *const a_msg=m_nullString, int m_exitCode=CH_DEFAULT_ERROR_CODE)
Print out message to cerr and exit with the specified exit code. 
 
void homogeneousCFInterp(LevelData< FArrayBox > &a_phif)
 
virtual void AMRResidualNC(LevelData< FArrayBox > &a_residual, const LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_rhs, bool a_homogeneousPhysBC, AMRLevelOp< LevelData< FArrayBox > > *a_finerOp)
 
void cfinterp(const LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_phiCoarse)
 
virtual void AMRRestrict(LevelData< FArrayBox > &a_resCoarse, const LevelData< FArrayBox > &a_residual, const LevelData< FArrayBox > &a_correction, const LevelData< FArrayBox > &a_coarseCorrection, bool a_skip_res=false)
 
virtual void applyOpNoExchange(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_phi, bool a_homogeneous=false)
 
RefCountedPtr< LevelData< FluxBox > > getEta() const
access function 
Definition: ViscousTensorOp.H:491
 
LayoutData< CFIVS > m_hiCFIVS[SpaceDim]
Definition: ViscousTensorOp.H:531
 
A Rectangular Domain on an Integer Lattice. 
Definition: Box.H:465
 
int m_relaxMinIter
Definition: ViscousTensorOp.H:654
 
Vector< Real > m_dx
Definition: ViscousTensorOp.H:646
 
int m_relaxMinIter
Definition: ViscousTensorOp.H:523
 
void operator=(const ViscousTensorOpFactory &a_opin)
Definition: ViscousTensorOp.H:667
 
Definition: DataIndex.H:112
 
Vector< RefCountedPtr< LevelData< FluxBox > > > m_eta
Definition: ViscousTensorOp.H:640
 
const DisjointBoxLayout & disjointBoxLayout() const
Definition: LevelData.H:225
 
virtual void createCoarsened(LevelData< FArrayBox > &a_lhs, const LevelData< FArrayBox > &a_rhs, const int &a_refRat)
 
virtual void AMRProlong(LevelData< FArrayBox > &a_correction, const LevelData< FArrayBox > &a_coarseCorrection)
 
const Box & box() const
Returns cell-centered box which defines fluxBox. 
 
Definition: FArrayBox.H:45
 
virtual void preCond(LevelData< FArrayBox > &a_correction, const LevelData< FArrayBox > &a_residual)
 
ViscousTensorOpFactory()
weak construction is bad 
Definition: ViscousTensorOp.H:657
 
void AMROperator(LevelData< FArrayBox > &a_LofPhi, const LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_phiCoarse, bool a_homogeneousDomBC, AMRLevelOp< LevelData< FArrayBox > > *a_finerOp)
 
virtual void AMRResidual(LevelData< FArrayBox > &a_residual, const LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_phi, const LevelData< FArrayBox > &a_phiCoarse, const LevelData< FArrayBox > &a_rhs, bool a_homogeneousPhysBC, AMRLevelOp< LevelData< FArrayBox > > *a_finerOp)
 
Real m_safety
Definition: ViscousTensorOp.H:519
 
RefCountedPtr< LevelData< FluxBox > > m_eta
Definition: ViscousTensorOp.H:500
 
virtual Real norm(const LevelData< FArrayBox > &a_x, int a_ord)
 
Real m_relaxTolerance
Definition: ViscousTensorOp.H:521
 
Vector< int > m_refRatios
Definition: ViscousTensorOp.H:648
 
Real m_safety
Definition: ViscousTensorOp.H:652
 
virtual void prolongIncrement(LevelData< FArrayBox > &a_phiThisLevel, const LevelData< FArrayBox > &a_correctCoarse)
 
void writeLevelname(const LevelData< FArrayBox > *a_dataPtr, const char *a_filename)
 
void define(const Box &bx, int n=1)
Resize FluxBox similar to BaseFab::resize() 
 
static int s_prolongType
prolongation type 
Definition: ViscousTensorOp.H:480
 
Real getAlpha() const
Definition: ViscousTensorOp.H:494
 
const Box & domainBox() const
Returns the logical computational domain. 
Definition: ProblemDomain.H:887
 
virtual Real AMRNorm(const LevelData< FArrayBox > &a_coarseResid, const LevelData< FArrayBox > &a_fineResid, const int &a_refRat, const int &a_ord)
 
Definition: AMRMultiGrid.H:233
 
DataIterator dataIterator() const
Parallel iterator. 
 
virtual void scale(LevelData< FArrayBox > &a_lhs, const Real &a_scale)
 
virtual ~ViscousTensorOpFactory()
Definition: ViscousTensorOp.H:562
 
virtual Real dotProduct(const LevelData< FArrayBox > &a_1, const LevelData< FArrayBox > &a_2)
 
Vector< IntVect > m_colors
Definition: ViscousTensorOp.H:535
 
LevelData< FArrayBox > m_phic
Definition: ViscousTensorOp.H:643
 
virtual void AMRUpdateResidual(LevelData< FArrayBox > &a_residual, const LevelData< FArrayBox > &a_correction, const LevelData< FArrayBox > &a_coarseCorrection)
 
virtual void AMROperatorNC(LevelData< FArrayBox > &a_LofPhi, const LevelData< FArrayBox > &a_phiFine, const LevelData< FArrayBox > &a_phi, bool a_homogeneousBC, AMRLevelOp< LevelData< FArrayBox > > *a_finerOp)
 
TensorCFInterp m_interpWithCoarser
Definition: ViscousTensorOp.H:528
 
static void getFaceDivAndGrad(FArrayBox &a_faceDiv, FArrayBox &a_faceGrad, const FArrayBox &a_data, const FArrayBox &a_gradData, const ProblemDomain &a_domain, const Box &a_faceBox, const int &a_faceDir, const Real a_dx)
 
int m_refToFine
Definition: ViscousTensorOp.H:506
 
ViscousTensorOpFactory(const ViscousTensorOpFactory &a_opin)
Definition: ViscousTensorOp.H:662
 
Vector< RefCountedPtr< LevelData< FluxBox > > > m_lambda
Definition: ViscousTensorOp.H:641
 
Definition: ViscousTensorOp.H:43
 
RefCountedPtr< LevelData< FArrayBox > > m_acoef
Definition: ViscousTensorOp.H:502