EBConductivityOp Class Reference

#include <EBConductivityOp.H>

Inheritance diagram for EBConductivityOp:

Public Member Functions
virtual void	dumpAMR (Vector< LevelData< EBCellFAB > *> &a_data, string name)
	for debugging More...
virtual void	dumpLevel (LevelData< EBCellFAB > &a_data, string name)
	for debugging More...
	EBConductivityOp (const EBLevelGrid &a_eblgFine, const EBLevelGrid &a_eblg, const EBLevelGrid &a_eblgCoar, const EBLevelGrid &a_eblgCoarMG, const RefCountedPtr< EBQuadCFInterp > &a_quadCFI, const RefCountedPtr< ConductivityBaseDomainBC > &a_domainBC, const RefCountedPtr< ConductivityBaseEBBC > &a_ebBC, const Real &a_dx, const Real &a_dxCoar, const int &a_refToFine, const int &a_refToCoar, const bool &a_hasFine, const bool &a_hasCoar, const bool &a_hasMGObjects, const bool &a_layoutChanged, const Real &a_alpha, const Real &a_beta, const RefCountedPtr< LevelData< EBCellFAB > > &a_acoef, const RefCountedPtr< LevelData< EBFluxFAB > > &a_bcoef, const RefCountedPtr< LevelData< BaseIVFAB< Real > > > &a_bcoIrreg, const IntVect &a_ghostCellsPhi, const IntVect &a_ghostCellsRHS, const int &a_relaxType)
	EBConductivityOp (const EBLevelGrid &a_eblgFine, const EBLevelGrid &a_eblg, const EBLevelGrid &a_eblgCoar, const EBLevelGrid &a_eblgCoarMG, const RefCountedPtr< EBQuadCFInterp > &a_quadCFI, const RefCountedPtr< ConductivityBaseDomainBC > &a_domainBC, const RefCountedPtr< ConductivityBaseEBBC > &a_ebBC, const Real &a_dx, const Real &a_dxCoar, const int &a_refToFine, const int &a_refToCoar, const bool &a_hasFine, const bool &a_hasCoar, const bool &a_hasMGObjects, const bool &a_layoutChanged, const Real &a_alpha, const Real &a_beta, const RefCountedPtr< LevelData< EBCellFAB > > &a_acoef0, const RefCountedPtr< LevelData< EBCellFAB > > &a_acoef1, const RefCountedPtr< LevelData< EBCellFAB > > &a_acoef, const RefCountedPtr< LevelData< EBFluxFAB > > &a_bcoef, const RefCountedPtr< LevelData< BaseIVFAB< Real > > > &a_bcoIrreg, const IntVect &a_ghostCellsPhi, const IntVect &a_ghostCellsRHS, const int &a_relaxType)
	~EBConductivityOp ()
	Destructor. More...
Real	getSafety ()
void	resetACoefficient (RefCountedPtr< LevelData< EBCellFAB > > &a_acoef)
virtual void	kappaScale (LevelData< EBCellFAB > &a_rhs)
	for eb only. kappa weight the rhs but do not multiply by the identity coefficient More...
void	AMRResidualNC (LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_rhs, bool a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *a_finerOp)
void	AMROperatorNC (LevelData< EBCellFAB > &a_LofPhi, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi, bool a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *a_finerOp)
void	setAlphaAndBeta (const Real &a_alpha, const Real &a_beta)
void	diagonalScale (LevelData< EBCellFAB > &a_rhs, bool a_kappaWeighted)
void	divideByIdentityCoef (LevelData< EBCellFAB > &a_rhs)
void	fillGrad (const LevelData< EBCellFAB > &a_phi)
	These functions are part of the LevelTGA interface...... More...
void	getFlux (EBFluxFAB &a_flux, const LevelData< EBCellFAB > &a_data, const Box &a_grid, const DataIndex &a_dit, Real a_scale)
void	getFlux (EBFaceFAB &a_fluxCentroid, const EBCellFAB &a_phi, const Box &a_ghostedBox, const Box &a_fabBox, const ProblemDomain &a_domain, const EBISBox &a_ebisBox, const Real &a_dx, const DataIndex &a_datInd, const int &a_idir)
void	setTime (Real a_oldTime, Real a_mu, Real a_dt)
void	finerOperatorChanged (const MGLevelOp< LevelData< EBCellFAB > > &a_operator, int a_coarseningFactor)
virtual void	residual (LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_rhs, bool a_homogeneousPhysBC=false)
virtual void	preCond (LevelData< EBCellFAB > &a_opPhi, const LevelData< EBCellFAB > &a_phi)
virtual void	applyOp (LevelData< EBCellFAB > &a_opPhi, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > *const a_phiCoarse, const bool &a_homogeneousPhysBC, const bool &a_homogeneousCFBC)
virtual void	applyOpNoBoundary (LevelData< EBCellFAB > &a_opPhi, const LevelData< EBCellFAB > &a_phi)
	virtual function called by LevelTGA More...
virtual void	applyOp (LevelData< EBCellFAB > &a_opPhi, const LevelData< EBCellFAB > &a_phi, bool a_homogeneousPhysBC)
virtual void	create (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_rhs)
virtual void	createCoarsened (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_rhs, const int &a_refRat)
Real	AMRNorm (const LevelData< EBCellFAB > &a_coarResid, const LevelData< EBCellFAB > &a_fineResid, const int &a_refRat, const int &a_ord)
virtual void	assign (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_rhs)
virtual Real	dotProduct (const LevelData< EBCellFAB > &a_1, const LevelData< EBCellFAB > &a_2)
virtual void	incr (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_x, Real a_scale)
virtual void	axby (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_x, const LevelData< EBCellFAB > &a_y, Real a_a, Real a_b)
virtual void	scale (LevelData< EBCellFAB > &a_lhs, const Real &a_scale)
virtual Real	norm (const LevelData< EBCellFAB > &a_rhs, int a_ord)
virtual void	setToZero (LevelData< EBCellFAB > &a_lhs)
virtual void	setVal (LevelData< EBCellFAB > &a_lhs, const Real &a_value)
virtual void	createCoarser (LevelData< EBCellFAB > &a_coarse, const LevelData< EBCellFAB > &a_fine, bool a_ghosted)
virtual void	relax (LevelData< EBCellFAB > &a_e, const LevelData< EBCellFAB > &a_residual, int a_iterations)
virtual void	relaxGauSai (LevelData< EBCellFAB > &a_e, const LevelData< EBCellFAB > &a_residual, int a_iterations)
virtual void	relaxPoiJac (LevelData< EBCellFAB > &a_e, const LevelData< EBCellFAB > &a_residual, int a_iterations)
virtual void	relaxGSRBFast (LevelData< EBCellFAB > &a_e, const LevelData< EBCellFAB > &a_residual, int a_iterations)
virtual void	restrictResidual (LevelData< EBCellFAB > &a_resCoarse, LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_rhsFine)
virtual void	prolongIncrement (LevelData< EBCellFAB > &a_phiThisLevel, const LevelData< EBCellFAB > &a_correctCoarse)
virtual int	refToCoarser ()
virtual int	refToFiner ()
virtual void	AMRResidual (LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_phiCoarse, const LevelData< EBCellFAB > &a_rhs, bool a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *a_finerOp)
virtual void	AMRResidualNF (LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_phiCoarse, const LevelData< EBCellFAB > &a_rhs, bool a_homogeneousBC)
virtual void	AMROperator (LevelData< EBCellFAB > &a_LofPhi, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_phiCoarse, bool a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *a_finerOp)
virtual void	AMROperatorNF (LevelData< EBCellFAB > &a_LofPhi, const LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_phiCoarse, bool a_homogeneousBC)
virtual void	AMRRestrict (LevelData< EBCellFAB > &a_resCoarse, const LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_correction, const LevelData< EBCellFAB > &a_coarseCorrection)
virtual void	AMRProlong (LevelData< EBCellFAB > &a_correction, const LevelData< EBCellFAB > &a_coarseCorrection)
virtual void	AMRUpdateResidual (LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_correction, const LevelData< EBCellFAB > &a_coarseCorrection)
void	reflux (LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi, AMRLevelOp< LevelData< EBCellFAB > > *a_finerOp)
void	gsrbColor (LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_lph, const LevelData< EBCellFAB > &a_rhs, const IntVect &a_color)
void	getDivFStencil (VoFStencil &a_vofStencil, const VolIndex &a_vof, const DataIndex &a_dit)
void	getFluxStencil (VoFStencil &a_fluxStencil, const FaceIndex &a_face, const DataIndex &a_dit)
void	getFaceCenteredFluxStencil (VoFStencil &a_fluxStencil, const FaceIndex &a_face, const DataIndex &a_dit)
void	incrOpRegularDir (EBCellFAB &a_lhs, const EBCellFAB &a_phi, const bool &a_homogeneous, const int &a_dir, const DataIndex &a_datInd)
void	applyOpIrregular (EBCellFAB &a_lhs, const EBCellFAB &a_phi, const bool &a_homogeneous, const DataIndex &a_datInd)
const EBLevelGrid &	getEBLG () const
Public Member Functions inherited from LevelTGAHelmOp< LevelData< EBCellFAB >, EBFluxFAB >
	LevelTGAHelmOp ()
	LevelTGAHelmOp (bool a_isTimeIndependent)
virtual	~LevelTGAHelmOp ()
	Destructor. More...
Public Member Functions inherited from TGAHelmOp< LevelData< EBCellFAB > >
	TGAHelmOp ()
	TGAHelmOp (bool a_isTimeDependent)
virtual	~TGAHelmOp ()
	Destructor. More...
virtual void	diagonalScale (LevelData< EBCellFAB > &a_rhs)
virtual void	setTime (Real a_time)
bool	isTimeDependent () const
	Returns true if the operator is time-dependent, false otherwise. More...
virtual LevelData< EBCellFAB > &	identityCoef ()
	Allows access to the identity coefficient data for the operator. More...
Public Member Functions inherited from AMRLevelOp< LevelData< EBCellFAB > >
	AMRLevelOp ()
	Constructor. More...
virtual void	dumpStuff (Vector< LevelData< EBCellFAB > * > data, string filename)
virtual	~AMRLevelOp ()
	Destructor. More...
virtual void	outputLevel (LevelData< EBCellFAB > &a_rhs, string &a_name)
virtual void	outputAMR (Vector< LevelData< EBCellFAB > * > &a_rhs, string &a_name)
virtual void	buildCopier (Copier &a_copier, const LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_rhs)
virtual void	assignCopier (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_rhs, const Copier &a_copier)
virtual void	zeroCovered (LevelData< EBCellFAB > &a_lhs, LevelData< EBCellFAB > &a_rhs, const Copier &a_copier)
virtual Real	localMaxNorm (const LevelData< EBCellFAB > &a_phi)
virtual void	AMRProlongS (LevelData< EBCellFAB > &a_correction, const LevelData< EBCellFAB > &a_coarseCorrection, LevelData< EBCellFAB > &a_temp, const Copier &a_copier)
virtual void	AMRRestrictS (LevelData< EBCellFAB > &a_resCoarse, const LevelData< EBCellFAB > &a_residual, const LevelData< EBCellFAB > &a_correction, const LevelData< EBCellFAB > &a_coarseCorrection, LevelData< EBCellFAB > &scratch)
virtual unsigned int	orderOfAccuracy (void) const
virtual void	enforceCFConsistency (LevelData< EBCellFAB > &a_coarseCorrection, const LevelData< EBCellFAB > &a_correction)
	This routine is for operators with orderOfAccuracy()>2. More...
Public Member Functions inherited from MGLevelOp< LevelData< EBCellFAB > >
	MGLevelOp ()
	Constructor. More...
virtual	~MGLevelOp ()
	Destructor. More...
void	addObserver (MGLevelOpObserver< LevelData< EBCellFAB > > *a_observer)
void	removeObserver (MGLevelOpObserver< LevelData< EBCellFAB > > *a_observer)
void	addCoarserObserver (MGLevelOp< LevelData< EBCellFAB > > *a_operator, int a_coarseningFactor)
void	notifyObserversOfChange ()
	This should be called whenever the operator's data is updated. More...
int	numObservers () const
	Returns the number of objects observing this operator. More...
Public Member Functions inherited from LinearOp< LevelData< EBCellFAB > >
virtual	~LinearOp ()
virtual void	clear (LevelData< EBCellFAB > &a_lhs)
virtual void	assignLocal (LevelData< EBCellFAB > &a_lhs, const LevelData< EBCellFAB > &a_rhs)
virtual void	mDotProduct (const LevelData< EBCellFAB > &a_1, const int a_sz, const LevelData< EBCellFAB > a_2[], Real a_mdots[])
virtual Real	dx () const
virtual void	write (const LevelData< EBCellFAB > *a, const char *filename)
Public Member Functions inherited from MGLevelOpObserver< LevelData< EBCellFAB > >
	MGLevelOpObserver ()
	Base level Constructor. Called by all subclasses. More...
virtual	~MGLevelOpObserver ()
	Destructor. More...
virtual void	operatorChanged (const MGLevelOp< LevelData< EBCellFAB > > &a_operator)
void	setObservee (MGLevelOp< LevelData< EBCellFAB > > *a_observee)
void	clearObservee ()

Protected Member Functions
void	incrOpRegularAllDirs (Box *a_loBox, Box *a_hiBox, int *a_hasLo, int *a_hasHi, Box &a_curDblBox, Box &a_curPhiBox, int a_nComps, BaseFab< Real > &a_curOpPhiFAB, const BaseFab< Real > &a_curPhiFAB, bool a_homogeneousPhysBC, const DataIndex &a_dit)
void	applyDomainFlux (Box *a_loBox, Box *a_hiBox, int *a_hasLo, int *a_hasHi, Box &a_dblBox, int a_nComps, BaseFab< Real > &a_phiFAB, bool a_homogeneousPhysBC, const DataIndex &a_dit)
void	GSColorAllIrregular (EBCellFAB &a_phi, const EBCellFAB &a_rhs, const int &a_icolor, const DataIndex &a_dit)
void	dumpFABPoint (const EBCellFAB &a_fab, const DataIndex &a_dit, const string &a_blab)
void	dumpLevelPoint (const LevelData< EBCellFAB > &a_res, const string &a_blab)
void	calculateAlphaWeight ()
void	defineStencils ()
void	defineColorStencils (Box a_ideBoxLo[SpaceDim], Box a_ideBoxHi[SpaceDim])
void	defineEBCFStencils ()
void	getFluxEBCF (EBFaceFAB &a_flux, const EBCellFAB &a_phi, const Box &a_ghostedBox, Vector< FaceIndex > &a_faceitEBCF, Vector< VoFStencil > &a_stenEBCF)
void	getFluxRegOnly (EBFaceFAB &a_fluxCentroid, const EBCellFAB &a_phi, const Box &a_ghostedBox, const Real &a_dx, const DataIndex &a_datInd, const int &a_idir)
void	calculateRelaxationCoefficient ()

Protected Attributes
LayoutData< Vector< FaceIndex > >	m_faceitCoar [2 *SpaceDim]
LayoutData< Vector< VoFStencil > >	m_stencilCoar [2 *SpaceDim]
LayoutData< VoFIterator >	m_vofItIrregColorDomLo [EBAMRPOVC_NUMSTEN][SpaceDim]
LayoutData< VoFIterator >	m_vofItIrregColorDomHi [EBAMRPOVC_NUMSTEN][SpaceDim]
LayoutData< BaseIVFAB< Real > >	m_cacheEBxDomainFluxLo [EBAMRPOVC_NUMSTEN][SpaceDim]
LayoutData< BaseIVFAB< Real > >	m_cacheEBxDomainFluxHi [EBAMRPOVC_NUMSTEN][SpaceDim]
LayoutData< RefCountedPtr< EBStencil > >	m_colorEBStencil [EBAMRPOVC_NUMSTEN]
int	m_relaxType
const IntVect	m_ghostCellsPhi
const IntVect	m_ghostCellsRHS
RefCountedPtr< EBQuadCFInterp >	m_quadCFIWithCoar
EBLevelGrid	m_eblg
EBLevelGrid	m_eblgFine
EBLevelGrid	m_eblgCoar
EBLevelGrid	m_eblgCoarMG
EBLevelGrid	m_eblgCoarsenedFine
RefCountedPtr< ConductivityBaseDomainBC >	m_domainBC
RefCountedPtr< ConductivityBaseEBBC >	m_ebBC
Real	m_dxFine
Real	m_dx
Real	m_dxCoar
RefCountedPtr< LevelData< EBCellFAB > >	m_acoef
RefCountedPtr< LevelData< EBCellFAB > >	m_acoef0
RefCountedPtr< LevelData< EBCellFAB > >	m_acoef1
RefCountedPtr< LevelData< EBFluxFAB > >	m_bcoef
RefCountedPtr< LevelData< BaseIVFAB< Real > > >	m_bcoIrreg
Real	m_alpha
Real	m_beta
LayoutData< BaseIVFAB< Real > >	m_alphaDiagWeight
LayoutData< BaseIVFAB< Real > >	m_betaDiagWeight
int	m_refToFine
int	m_refToCoar
bool	m_hasEBCF
bool	m_hasFine
bool	m_hasInterpAve
bool	m_hasCoar
EBMGAverage	m_ebAverage
EBMGInterp	m_ebInterp
LayoutData< RefCountedPtr< EBStencil > >	m_opEBStencil
LevelData< EBCellFAB >	m_relCoef
	Multigrid relaxation coefficient. More...
LayoutData< VoFIterator >	m_vofIterIrreg
LayoutData< VoFIterator >	m_vofIterMulti
LayoutData< VoFIterator >	m_vofIterDomLo [CH_SPACEDIM]
LayoutData< VoFIterator >	m_vofIterDomHi [CH_SPACEDIM]
LayoutData< CFIVS >	m_loCFIVS [SpaceDim]
LayoutData< CFIVS >	m_hiCFIVS [SpaceDim]
EBFastFR	m_fastFR
bool	m_hasMGObjects
bool	m_layoutChanged
EBMGAverage	m_ebAverageMG
EBMGInterp	m_ebInterpMG
DisjointBoxLayout	m_dblCoarMG
EBISLayout	m_ebislCoarMG
ProblemDomain	m_domainCoarMG
Vector< IntVect >	m_colors

Static Protected Attributes
static bool	s_turnOffBCs
static IntVect	s_ivDebug

Private Member Functions
void	incrementFRCoar (EBFastFR &a_fluxReg, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi)
void	incrementFRFine (EBFastFR &a_fluxReg, const LevelData< EBCellFAB > &a_phiFine, const LevelData< EBCellFAB > &a_phi, AMRLevelOp< LevelData< EBCellFAB > > *a_finerOp)
void	getFlux (FArrayBox &a_flux, const FArrayBox &a_phi, const Box &a_faceBox, const int &a_idir, const Real &a_dx, const DataIndex &a_datInd)
void	applyCFBCs (LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > *const a_phiCoarse, bool a_homogeneousCFBC)
void	getOpVoFStencil (VoFStencil &a_stencil, const EBISBox &a_ebisbox, const VolIndex &a_vof)
void	getOpVoFStencil (VoFStencil &a_stencil, const int &a_dir, const Vector< VolIndex > &a_allMonotoneVoFs, const EBISBox &a_ebisbox, const VolIndex &a_vof, const bool &a_lowOrder)
void	getOpFaceStencil (VoFStencil &a_stencil, const Vector< VolIndex > &a_allMonotoneVofs, const EBISBox &a_ebisbox, const VolIndex &a_vof, int a_dir, const Side::LoHiSide &a_side, const FaceIndex &a_face, const bool &a_lowOrder)
void	levelJacobi (LevelData< EBCellFAB > &a_phi, const LevelData< EBCellFAB > &a_rhs)
void	applyHomogeneousCFBCs (LevelData< EBCellFAB > &a_phi)
void	applyHomogeneousCFBCs (EBCellFAB &a_phi, const DataIndex &a_datInd, int a_idir, Side::LoHiSide a_hiorlo)
	EBConductivityOp ()
	Default constructor. Creates an undefined conductivity operator. More...
	EBConductivityOp (const EBConductivityOp &a_opin)
void	operator= (const EBConductivityOp &a_opin)

Detailed Description

This class implements an operator that solves the equation (alpha a + beta div (b grad) )phi = rhs using the AMRLevelOp interface.

Constructor & Destructor Documentation

EBConductivityOp() [1/4]

EBConductivityOp::EBConductivityOp	(	const EBLevelGrid &	a_eblgFine,
		const EBLevelGrid &	a_eblg,
		const EBLevelGrid &	a_eblgCoar,
		const EBLevelGrid &	a_eblgCoarMG,
		const RefCountedPtr< EBQuadCFInterp > &	a_quadCFI,
		const RefCountedPtr< ConductivityBaseDomainBC > &	a_domainBC,
		const RefCountedPtr< ConductivityBaseEBBC > &	a_ebBC,
		const Real &	a_dx,
		const Real &	a_dxCoar,
		const int &	a_refToFine,
		const int &	a_refToCoar,
		const bool &	a_hasFine,
		const bool &	a_hasCoar,
		const bool &	a_hasMGObjects,
		const bool &	a_layoutChanged,
		const Real &	a_alpha,
		const Real &	a_beta,
		const RefCountedPtr< LevelData< EBCellFAB > > &	a_acoef,
		const RefCountedPtr< LevelData< EBFluxFAB > > &	a_bcoef,
		const RefCountedPtr< LevelData< BaseIVFAB< Real > > > &	a_bcoIrreg,
		const IntVect &	a_ghostCellsPhi,
		const IntVect &	a_ghostCellsRHS,
		const int &	a_relaxType
	)

Constructs a conductivity operator using the given data. This constructor is for time-independent a and b coefficients. If you are approaching this operator from this interface, consider backing away and using EBConductivityOpFactory to generate these objects. Really. Ghost cell arguments are there for caching reasons. Once you set them, an error is thrown if you send in data that does not match.

Parameters

a_eblgFine	grid at finer level
a_eblg	grid at this level
a_eblgCoar	grid at coarser level
a_eblgCoarMG	grid at intermediate multigrid level
a_domainBC	domain boundary conditions at this level
a_ebBC	eb boundary conditions at this level
a_dx	grid spacing at this level
a_origin	offset to lowest corner of the domain
a_refToFine	refinement ratio to finer level
a_refToCoar	refinement ratio to coarser level
a_hasFiner	true if there is a finer AMR level, false otherwise.
a_hasCoarser	true if there is a coarser AMR level.
a_hasCoarserMG	true if there is a coarser MultiGrid level.
a_preCondIters	number of iterations to do for pre-conditioning
a_relaxType	0 means point Jacobi, 1 is Gauss-Seidel.
a_acoef	coefficent of identity
a_bcoef	coefficient of gradient.
a_ghostCellsPhi	Number of ghost cells in phi, correction
a_ghostCellsRhs	Number of ghost cells in RHS, residual, lphi

EBConductivityOp() [2/4]

EBConductivityOp::EBConductivityOp	(	const EBLevelGrid &	a_eblgFine,
		const EBLevelGrid &	a_eblg,
		const EBLevelGrid &	a_eblgCoar,
		const EBLevelGrid &	a_eblgCoarMG,
		const RefCountedPtr< EBQuadCFInterp > &	a_quadCFI,
		const RefCountedPtr< ConductivityBaseDomainBC > &	a_domainBC,
		const RefCountedPtr< ConductivityBaseEBBC > &	a_ebBC,
		const Real &	a_dx,
		const Real &	a_dxCoar,
		const int &	a_refToFine,
		const int &	a_refToCoar,
		const bool &	a_hasFine,
		const bool &	a_hasCoar,
		const bool &	a_hasMGObjects,
		const bool &	a_layoutChanged,
		const Real &	a_alpha,
		const Real &	a_beta,
		const RefCountedPtr< LevelData< EBCellFAB > > &	a_acoef0,
		const RefCountedPtr< LevelData< EBCellFAB > > &	a_acoef1,
		const RefCountedPtr< LevelData< EBCellFAB > > &	a_acoef,
		const RefCountedPtr< LevelData< EBFluxFAB > > &	a_bcoef,
		const RefCountedPtr< LevelData< BaseIVFAB< Real > > > &	a_bcoIrreg,
		const IntVect &	a_ghostCellsPhi,
		const IntVect &	a_ghostCellsRHS,
		const int &	a_relaxType
	)

Constructs a conductivity operator using the given data. This constructor is for a time-dependent a coefficient and a time-independent b coefficient. Ghost cell arguments are there for caching reasons. Once you set them, an error is thrown if you send in data that does not match.

Parameters

a_eblgFine	grid at finer level
a_eblg	grid at this level
a_eblgCoar	grid at coarser level
a_eblgCoarMG	grid at intermediate multigrid level
a_domainBC	domain boundary conditions at this level
a_ebBC	eb boundary conditions at this level
a_dx	grid spacing at this level
a_origin	offset to lowest corner of the domain
a_refToFine	refinement ratio to finer level
a_refToCoar	refinement ratio to coarser level
a_hasFiner	true if there is a finer AMR level, false otherwise.
a_hasCoarser	true if there is a coarser AMR level.
a_hasCoarserMG	true if there is a coarser MultiGrid level.
a_preCondIters	number of iterations to do for pre-conditioning
a_relaxType	0 means point Jacobi, 1 is Gauss-Seidel.
a_acoef0	Beginning-of-step identity coefficient.
a_acoef1	End-of-step identity coefficient.
a_acoef	Time-interpolated identity coefficient.
a_bcoef	coefficient of gradient.
a_ghostCellsPhi	Number of ghost cells in phi, correction
a_ghostCellsRhs	Number of ghost cells in RHS, residual, lphi

~EBConductivityOp()

EBConductivityOp::~EBConductivityOp

(

)

Destructor.

Referenced by dumpLevel().

EBConductivityOp() [3/4]

EBConductivityOp::EBConductivityOp ( )

private

Default constructor. Creates an undefined conductivity operator.

Referenced by dumpLevel().

EBConductivityOp() [4/4]

EBConductivityOp::EBConductivityOp ( const EBConductivityOp &  a_opin )

inlineprivate

References MayDay::Error().

Member Function Documentation

dumpAMR()

virtual void EBConductivityOp::dumpAMR ( Vector< LevelData< EBCellFAB > *> &  a_data, string  name  )

inlinevirtual

for debugging

Reimplemented from AMRLevelOp< LevelData< EBCellFAB > >.

References writeEBAMRname().

dumpLevel()

virtual void EBConductivityOp::dumpLevel ( LevelData< EBCellFAB > &  a_data, string  name  )

inlinevirtual

for debugging

Reimplemented from AMRLevelOp< LevelData< EBCellFAB > >.

References AMRNorm(), AMROperator(), AMROperatorNC(), AMROperatorNF(), AMRProlong(), AMRResidual(), AMRResidualNC(), AMRResidualNF(), AMRRestrict(), AMRUpdateResidual(), applyOp(), applyOpIrregular(), applyOpNoBoundary(), assign(), axby(), create(), createCoarsened(), createCoarser(), diagonalScale(), divideByIdentityCoef(), dotProduct(), EBConductivityOp(), fillGrad(), finerOperatorChanged(), getDivFStencil(), getFaceCenteredFluxStencil(), getFlux(), getFluxStencil(), getSafety(), gsrbColor(), incr(), incrOpRegularDir(), kappaScale(), norm(), preCond(), prolongIncrement(), reflux(), refToCoarser(), refToFiner(), relax(), relaxGauSai(), relaxGSRBFast(), relaxPoiJac(), resetACoefficient(), residual(), restrictResidual(), scale(), setAlphaAndBeta(), setTime(), setToZero(), setVal(), writeEBLevelname(), and ~EBConductivityOp().

getSafety()

Real EBConductivityOp::getSafety

(

)

Referenced by dumpLevel().

resetACoefficient()

void EBConductivityOp::resetACoefficient

(

RefCountedPtr< LevelData< EBCellFAB > > &

a_acoef

)

This sets the data storage for the a coefficient to a different object. Use this only if you know what you're doing.

Parameters

a_acoef

The new object that stores the a coefficient.

Referenced by dumpLevel().

kappaScale()

virtual void EBConductivityOp::kappaScale ( LevelData< EBCellFAB > &  a_rhs )

virtual

for eb only. kappa weight the rhs but do not multiply by the identity coefficient

Reimplemented from TGAHelmOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMRResidualNC()

void EBConductivityOp::AMRResidualNC ( LevelData< EBCellFAB > &  a_residual, const LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_rhs, bool  a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *  a_finerOp  )

virtual

a_residual = a_rhs - L(a_phiFine, a_phi) no coaser AMR level

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMROperatorNC()

void EBConductivityOp::AMROperatorNC ( LevelData< EBCellFAB > &  a_LofPhi, const LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_phi, bool  a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *  a_finerOp  )

virtual

apply AMR operator no coaser AMR level

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

setAlphaAndBeta()

void EBConductivityOp::setAlphaAndBeta ( const Real &  a_alpha, const Real &  a_beta  )

virtual

Sets the scaling constants in the Helmholtz equation.

Parameters

a_alpha	The scaling constant that multiplies the identity term.
a_beta	The scaling constant that multiplies the derivative term.

Implements TGAHelmOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

diagonalScale()

void EBConductivityOp::diagonalScale ( LevelData< EBCellFAB > &  a_rhs, bool  a_kappaWeighted  )

virtual

Scales the right hand side of the Helmholtz equation by the identity term in the operator. If you are solving rho(x) dphi/dt = L(phi), this means multiply by rho (or kappa * rho in embedded boundary calculations.

Parameters

a_rhs	The right hand side of the equation to be scaled.
a_kappaWeighted	If set to true, a_rhs will be scaled by the volume fraction in addition to the identity term.

Reimplemented from TGAHelmOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

divideByIdentityCoef()

void EBConductivityOp::divideByIdentityCoef ( LevelData< EBCellFAB > &  a_rhs )

virtual

Divides the right hand side of the Helmholtz equation by the identity coefficient rho(x) in the equation rho(x) dphi/dt = L(phi).

Parameters

a_rhs

The right hand side of the equation to be scaled.

Implements TGAHelmOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

fillGrad()

void EBConductivityOp::fillGrad ( const LevelData< EBCellFAB > &  a_phi )

virtual

These functions are part of the LevelTGA interface......

Implements LevelTGAHelmOp< LevelData< EBCellFAB >, EBFluxFAB >.

Referenced by dumpLevel().

getFlux() [1/3]

void EBConductivityOp::getFlux ( EBFluxFAB &  a_flux, const LevelData< EBCellFAB > &  a_data, const Box &  a_grid, const DataIndex &  a_dit, Real  a_scale  )

virtual

Implements LevelTGAHelmOp< LevelData< EBCellFAB >, EBFluxFAB >.

Referenced by dumpLevel().

getFlux() [2/3]

void EBConductivityOp::getFlux	(	EBFaceFAB &	a_fluxCentroid,
		const EBCellFAB &	a_phi,
		const Box &	a_ghostedBox,
		const Box &	a_fabBox,
		const ProblemDomain &	a_domain,
		const EBISBox &	a_ebisBox,
		const Real &	a_dx,
		const DataIndex &	a_datInd,
		const int &	a_idir
	)

setTime()

void EBConductivityOp::setTime ( Real  a_oldTime, Real  a_mu, Real  a_dt  )

virtual

Sets the time-dependent state of the operator. This version of setTime allows one to linearly interpolate coefficients across an integration step, since it accepts arguments that define where in the step it is to be updated. The default implementation calls setTime(a_oldTime + a_mu * a_dt).

Parameters

a_oldTime	The time at the beginning of the current step.
a_mu	The fraction of the current step that has elapsed.
a_dt	The size of the current step.

Reimplemented from TGAHelmOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

finerOperatorChanged()

void EBConductivityOp::finerOperatorChanged ( const MGLevelOp< LevelData< EBCellFAB > > &  a_operator, int  a_coarseningFactor  )

virtual

This is called on multigrid operators when their AMR operators are altered.

Reimplemented from MGLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

residual()

virtual void EBConductivityOp::residual ( LevelData< EBCellFAB > &  a_lhs, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_rhs, bool  a_homogeneous = false  )

virtual

Say you are solving L(phi) = rhs. Make a_lhs = L(a_phi) - a_rhs. If a_homogeneous is true, evaluate the operator using homogeneous boundary conditions.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

preCond()

virtual void EBConductivityOp::preCond ( LevelData< EBCellFAB > &  a_cor, const LevelData< EBCellFAB > &  a_residual  )

virtual

Given the current state of the residual the correction, apply your preconditioner to a_cor.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

applyOp() [1/2]

virtual void EBConductivityOp::applyOp ( LevelData< EBCellFAB > &  a_opPhi, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > *const  a_phiCoarse, const bool &  a_homogeneousPhysBC, const bool &  a_homogeneousCFBC  )

virtual

This function assumes that coarse-fine boundary condtions have been dealt with.

Referenced by dumpLevel().

applyOpNoBoundary()

virtual void EBConductivityOp::applyOpNoBoundary ( LevelData< EBCellFAB > &  a_opPhi, const LevelData< EBCellFAB > &  a_phi  )

virtual

virtual function called by LevelTGA

Implements TGAHelmOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

applyOp() [2/2]

virtual void EBConductivityOp::applyOp ( LevelData< EBCellFAB > &  a_opPhi, const LevelData< EBCellFAB > &  a_phi, bool  a_homogeneousPhysBC  )

virtual

this is the linearop function. CFBC is set to homogeneous. phic is null

Implements LinearOp< LevelData< EBCellFAB > >.

create()

virtual void EBConductivityOp::create ( LevelData< EBCellFAB > &  a_lhs, const LevelData< EBCellFAB > &  a_rhs  )

virtual

Creat data holder a_lhs that mirrors a_rhs. You do not need to copy the data of a_rhs, just make a holder the same size.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

createCoarsened()

virtual void EBConductivityOp::createCoarsened ( LevelData< EBCellFAB > &  a_lhs, const LevelData< EBCellFAB > &  a_rhs, const int &  a_refRat  )

virtual

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMRNorm()

Real EBConductivityOp::AMRNorm ( const LevelData< EBCellFAB > &  a_coarResid, const LevelData< EBCellFAB > &  a_fineResid, const int &  a_refRat, const int &  a_ord  )

virtual

Reimplemented from AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

assign()

virtual void EBConductivityOp::assign ( LevelData< EBCellFAB > &  a_lhs, const LevelData< EBCellFAB > &  a_rhs  )

virtual

Set a_lhs equal to a_rhs.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

dotProduct()

virtual Real EBConductivityOp::dotProduct ( const LevelData< EBCellFAB > &  a_1, const LevelData< EBCellFAB > &  a_2  )

virtual

Compute and return the dot product of a_1 and a_2. In most contexts, this means return the sum over all data points of a_1*a_2.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

incr()

virtual void EBConductivityOp::incr ( LevelData< EBCellFAB > &  a_lhs, const LevelData< EBCellFAB > &  a_x, Real  a_scale  )

virtual

Increment by scaled amount (a_lhs += a_scale*a_x).

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

axby()

virtual void EBConductivityOp::axby ( LevelData< EBCellFAB > &  a_lhs, const LevelData< EBCellFAB > &  a_x, const LevelData< EBCellFAB > &  a_y, Real  a_a, Real  a_b  )

virtual

Set input to a scaled sum (a_lhs = a_a*a_x + a_b*a_y).

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

scale()

virtual void EBConductivityOp::scale ( LevelData< EBCellFAB > &  a_lhs, const Real &  a_scale  )

virtual

Multiply the input by a given scale (a_lhs *= a_scale).

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

norm()

virtual Real EBConductivityOp::norm ( const LevelData< EBCellFAB > &  a_rhs, int  a_ord  )

virtual

Return the norm of a_rhs. a_ord == 0 max norm, a_ord == 1 sum(abs(a_rhs)), else, L(a_ord) norm.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

setToZero()

virtual void EBConductivityOp::setToZero ( LevelData< EBCellFAB > &  a_lhs )

virtual

Set a_lhs to zero.

Implements LinearOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

setVal()

virtual void EBConductivityOp::setVal ( LevelData< EBCellFAB > &  a_lhs, const Real &  a_value  )

virtual

Referenced by dumpLevel().

createCoarser()

virtual void EBConductivityOp::createCoarser ( LevelData< EBCellFAB > &  a_coarse, const LevelData< EBCellFAB > &  a_fine, bool  ghosted  )

virtual

Create a coarsened (by two) version of the input data. This does not include averaging the data. So if a_fine is over a Box of (0, 0, 0) (63, 63, 63), a_fine should be over a Box (0, 0, 0) (31, 31, 31).

Implements MGLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

relax()

virtual void EBConductivityOp::relax ( LevelData< EBCellFAB > &  a_correction, const LevelData< EBCellFAB > &  a_residual, int  a_iterations  )

virtual

Use your relaxtion operator to remove the high frequency wave numbers from the correction so that it may be averaged to a coarser refinement. A point relaxtion scheme, for example takes the form a_correction -= lambda*(L(a_correction) - a_residual).

Implements MGLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

relaxGauSai()

virtual void EBConductivityOp::relaxGauSai ( LevelData< EBCellFAB > &  a_e, const LevelData< EBCellFAB > &  a_residual, int  a_iterations  )

virtual

Referenced by dumpLevel().

relaxPoiJac()

virtual void EBConductivityOp::relaxPoiJac ( LevelData< EBCellFAB > &  a_e, const LevelData< EBCellFAB > &  a_residual, int  a_iterations  )

virtual

Referenced by dumpLevel().

relaxGSRBFast()

virtual void EBConductivityOp::relaxGSRBFast ( LevelData< EBCellFAB > &  a_e, const LevelData< EBCellFAB > &  a_residual, int  a_iterations  )

virtual

Referenced by dumpLevel().

restrictResidual()

virtual void EBConductivityOp::restrictResidual ( LevelData< EBCellFAB > &  a_resCoarse, LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_rhsFine  )

virtual

Calculate restricted residual: a_resCoarse[2h] = I[h->2h] (a_rhsFine[h] - L[h](a_phiFine[h]))

Implements MGLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

prolongIncrement()

virtual void EBConductivityOp::prolongIncrement ( LevelData< EBCellFAB > &  a_phiThisLevel, const LevelData< EBCellFAB > &  a_correctCoarse  )

virtual

Correct the fine solution based on coarse correction: a_phiThisLevel += I[2h->h] (a_correctCoarse)

Implements MGLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

refToCoarser()

virtual int EBConductivityOp::refToCoarser ( )

virtual

Refinement ratio between this level and coarser level. Returns 1 when there are no coarser AMRLevelOp objects

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

refToFiner()

virtual int EBConductivityOp::refToFiner ( )

virtual

Refinement ratio between this level and coarser level. Returns 1 when there are no coarser AMRLevelOp objects

Referenced by dumpLevel().

AMRResidual()

virtual void EBConductivityOp::AMRResidual ( LevelData< EBCellFAB > &  a_residual, const LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_phiCoarse, const LevelData< EBCellFAB > &  a_rhs, bool  a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *  a_finerOp  )

virtual

a_residual = a_rhs - L(a_phi, a_phiFine, a_phiCoarse)

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMRResidualNF()

virtual void EBConductivityOp::AMRResidualNF ( LevelData< EBCellFAB > &  a_residual, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_phiCoarse, const LevelData< EBCellFAB > &  a_rhs, bool  a_homogeneousBC  )

virtual

a_residual = a_rhs - L(a_phi, a_phiCoarse)

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMROperator()

virtual void EBConductivityOp::AMROperator ( LevelData< EBCellFAB > &  a_LofPhi, const LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_phiCoarse, bool  a_homogeneousBC, AMRLevelOp< LevelData< EBCellFAB > > *  a_finerOp  )

virtual

a_residual = a_rhs - L(a_phi, a_phiFine, a_phiCoarse)

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMROperatorNF()

virtual void EBConductivityOp::AMROperatorNF ( LevelData< EBCellFAB > &  a_LofPhi, const LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_phiCoarse, bool  a_homogeneousBC  )

virtual

a_residual = a_rhs - L(a_phi, a_phiCoarse)

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMRRestrict()

virtual void EBConductivityOp::AMRRestrict ( LevelData< EBCellFAB > &  a_resCoarse, const LevelData< EBCellFAB > &  a_residual, const LevelData< EBCellFAB > &  a_correction, const LevelData< EBCellFAB > &  a_coarseCorrection  )

virtual

a_resCoarse = I[h-2h] (a_residual - L(a_correction, a_coarseCorrection))

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMRProlong()

virtual void EBConductivityOp::AMRProlong ( LevelData< EBCellFAB > &  a_correction, const LevelData< EBCellFAB > &  a_coarseCorrection  )

virtual

a_correction += I[2h->h](a_coarseCorrection)

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

AMRUpdateResidual()

virtual void EBConductivityOp::AMRUpdateResidual ( LevelData< EBCellFAB > &  a_residual, const LevelData< EBCellFAB > &  a_correction, const LevelData< EBCellFAB > &  a_coarseCorrection  )

virtual

a_residual = a_residual - L(a_correction, a_coarseCorrection)

Implements AMRLevelOp< LevelData< EBCellFAB > >.

Referenced by dumpLevel().

reflux()

void EBConductivityOp::reflux	(	LevelData< EBCellFAB > &	a_residual,
		const LevelData< EBCellFAB > &	a_phiFine,
		const LevelData< EBCellFAB > &	a_phi,
		AMRLevelOp< LevelData< EBCellFAB > > *	a_finerOp
	)

Referenced by dumpLevel().

gsrbColor()

void EBConductivityOp::gsrbColor	(	LevelData< EBCellFAB > &	a_phi,
		const LevelData< EBCellFAB > &	a_lph,
		const LevelData< EBCellFAB > &	a_rhs,
		const IntVect &	a_color
	)

Referenced by dumpLevel().

getDivFStencil()

void EBConductivityOp::getDivFStencil	(	VoFStencil &	a_vofStencil,
		const VolIndex &	a_vof,
		const DataIndex &	a_dit
	)

Referenced by dumpLevel().

getFluxStencil()

void EBConductivityOp::getFluxStencil	(	VoFStencil &	a_fluxStencil,
		const FaceIndex &	a_face,
		const DataIndex &	a_dit
	)

Referenced by dumpLevel().

getFaceCenteredFluxStencil()

void EBConductivityOp::getFaceCenteredFluxStencil	(	VoFStencil &	a_fluxStencil,
		const FaceIndex &	a_face,
		const DataIndex &	a_dit
	)

Referenced by dumpLevel().

incrOpRegularDir()

void EBConductivityOp::incrOpRegularDir	(	EBCellFAB &	a_lhs,
		const EBCellFAB &	a_phi,
		const bool &	a_homogeneous,
		const int &	a_dir,
		const DataIndex &	a_datInd
	)

Referenced by dumpLevel().

applyOpIrregular()

void EBConductivityOp::applyOpIrregular	(	EBCellFAB &	a_lhs,
		const EBCellFAB &	a_phi,
		const bool &	a_homogeneous,
		const DataIndex &	a_datInd
	)

Referenced by dumpLevel().

getEBLG()

const EBLevelGrid& EBConductivityOp::getEBLG ( ) const

inline

References applyDomainFlux(), GSColorAllIrregular(), incrOpRegularAllDirs(), and m_eblg.

incrOpRegularAllDirs()

void EBConductivityOp::incrOpRegularAllDirs ( Box *  a_loBox, Box *  a_hiBox, int *  a_hasLo, int *  a_hasHi, Box &  a_curDblBox, Box &  a_curPhiBox, int  a_nComps, BaseFab< Real > &  a_curOpPhiFAB, const BaseFab< Real > &  a_curPhiFAB, bool  a_homogeneousPhysBC, const DataIndex &  a_dit  )

protected

Referenced by getEBLG().

applyDomainFlux()

void EBConductivityOp::applyDomainFlux ( Box *  a_loBox, Box *  a_hiBox, int *  a_hasLo, int *  a_hasHi, Box &  a_dblBox, int  a_nComps, BaseFab< Real > &  a_phiFAB, bool  a_homogeneousPhysBC, const DataIndex &  a_dit  )

protected

Referenced by getEBLG().

GSColorAllIrregular()

void EBConductivityOp::GSColorAllIrregular ( EBCellFAB &  a_phi, const EBCellFAB &  a_rhs, const int &  a_icolor, const DataIndex &  a_dit  )

protected

Referenced by getEBLG().

dumpFABPoint()

void EBConductivityOp::dumpFABPoint ( const EBCellFAB &  a_fab, const DataIndex &  a_dit, const string &  a_blab  )

protected

dumpLevelPoint()

void EBConductivityOp::dumpLevelPoint ( const LevelData< EBCellFAB > &  a_res, const string &  a_blab  )

protected

calculateAlphaWeight()

void EBConductivityOp::calculateAlphaWeight ( )

protected

defineStencils()

void EBConductivityOp::defineStencils ( )

protected

defineColorStencils()

void EBConductivityOp::defineColorStencils ( Box  a_ideBoxLo[SpaceDim], Box  a_ideBoxHi[SpaceDim]  )

protected

defineEBCFStencils()

void EBConductivityOp::defineEBCFStencils ( )

protected

getFluxEBCF()

void EBConductivityOp::getFluxEBCF ( EBFaceFAB &  a_flux, const EBCellFAB &  a_phi, const Box &  a_ghostedBox, Vector< FaceIndex > &  a_faceitEBCF, Vector< VoFStencil > &  a_stenEBCF  )

protected

getFluxRegOnly()

void EBConductivityOp::getFluxRegOnly ( EBFaceFAB &  a_fluxCentroid, const EBCellFAB &  a_phi, const Box &  a_ghostedBox, const Real &  a_dx, const DataIndex &  a_datInd, const int &  a_idir  )

protected

calculateRelaxationCoefficient()

void EBConductivityOp::calculateRelaxationCoefficient ( )

protected

incrementFRCoar()

void EBConductivityOp::incrementFRCoar ( EBFastFR &  a_fluxReg, const LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_phi  )

private

incrementFRFine()

void EBConductivityOp::incrementFRFine ( EBFastFR &  a_fluxReg, const LevelData< EBCellFAB > &  a_phiFine, const LevelData< EBCellFAB > &  a_phi, AMRLevelOp< LevelData< EBCellFAB > > *  a_finerOp  )

private

getFlux() [3/3]

void EBConductivityOp::getFlux ( FArrayBox &  a_flux, const FArrayBox &  a_phi, const Box &  a_faceBox, const int &  a_idir, const Real &  a_dx, const DataIndex &  a_datInd  )

private

applyCFBCs()

void EBConductivityOp::applyCFBCs ( LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > *const  a_phiCoarse, bool  a_homogeneousCFBC  )

private

getOpVoFStencil() [1/2]

void EBConductivityOp::getOpVoFStencil ( VoFStencil &  a_stencil, const EBISBox &  a_ebisbox, const VolIndex &  a_vof  )

private

getOpVoFStencil() [2/2]

void EBConductivityOp::getOpVoFStencil ( VoFStencil &  a_stencil, const int &  a_dir, const Vector< VolIndex > &  a_allMonotoneVoFs, const EBISBox &  a_ebisbox, const VolIndex &  a_vof, const bool &  a_lowOrder  )

private

getOpFaceStencil()

void EBConductivityOp::getOpFaceStencil ( VoFStencil &  a_stencil, const Vector< VolIndex > &  a_allMonotoneVofs, const EBISBox &  a_ebisbox, const VolIndex &  a_vof, int  a_dir, const Side::LoHiSide &  a_side, const FaceIndex &  a_face, const bool &  a_lowOrder  )

private

levelJacobi()

void EBConductivityOp::levelJacobi ( LevelData< EBCellFAB > &  a_phi, const LevelData< EBCellFAB > &  a_rhs  )

private

applyHomogeneousCFBCs() [1/2]

void EBConductivityOp::applyHomogeneousCFBCs ( LevelData< EBCellFAB > &  a_phi )

private

applyHomogeneousCFBCs() [2/2]

void EBConductivityOp::applyHomogeneousCFBCs ( EBCellFAB &  a_phi, const DataIndex &  a_datInd, int  a_idir, Side::LoHiSide  a_hiorlo  )

private

operator=()

void EBConductivityOp::operator= ( const EBConductivityOp &  a_opin )

inlineprivate

References MayDay::Error().

Member Data Documentation

s_turnOffBCs

bool EBConductivityOp::s_turnOffBCs

staticprotected

s_ivDebug

IntVect EBConductivityOp::s_ivDebug

staticprotected

m_faceitCoar

LayoutData< Vector<FaceIndex> > EBConductivityOp::m_faceitCoar[2 *SpaceDim]

protected

m_stencilCoar

LayoutData< Vector<VoFStencil> > EBConductivityOp::m_stencilCoar[2 *SpaceDim]

protected

m_vofItIrregColorDomLo

LayoutData<VoFIterator > EBConductivityOp::m_vofItIrregColorDomLo[EBAMRPOVC_NUMSTEN][SpaceDim]

protected

m_vofItIrregColorDomHi

LayoutData<VoFIterator > EBConductivityOp::m_vofItIrregColorDomHi[EBAMRPOVC_NUMSTEN][SpaceDim]

protected

m_cacheEBxDomainFluxLo

LayoutData<BaseIVFAB<Real> > EBConductivityOp::m_cacheEBxDomainFluxLo[EBAMRPOVC_NUMSTEN][SpaceDim]

protected

m_cacheEBxDomainFluxHi

LayoutData<BaseIVFAB<Real> > EBConductivityOp::m_cacheEBxDomainFluxHi[EBAMRPOVC_NUMSTEN][SpaceDim]

protected

m_colorEBStencil

LayoutData<RefCountedPtr<EBStencil> > EBConductivityOp::m_colorEBStencil[EBAMRPOVC_NUMSTEN]

protected

m_relaxType

int EBConductivityOp::m_relaxType

protected

m_ghostCellsPhi

const IntVect EBConductivityOp::m_ghostCellsPhi

protected

m_ghostCellsRHS

const IntVect EBConductivityOp::m_ghostCellsRHS

protected

m_quadCFIWithCoar

RefCountedPtr<EBQuadCFInterp> EBConductivityOp::m_quadCFIWithCoar

protected

m_eblg

EBLevelGrid EBConductivityOp::m_eblg

protected

Referenced by getEBLG().

m_eblgFine

EBLevelGrid EBConductivityOp::m_eblgFine

protected

m_eblgCoar

EBLevelGrid EBConductivityOp::m_eblgCoar

protected

m_eblgCoarMG

EBLevelGrid EBConductivityOp::m_eblgCoarMG

protected

m_eblgCoarsenedFine

EBLevelGrid EBConductivityOp::m_eblgCoarsenedFine

protected

m_domainBC

RefCountedPtr<ConductivityBaseDomainBC> EBConductivityOp::m_domainBC

protected

m_ebBC

RefCountedPtr<ConductivityBaseEBBC> EBConductivityOp::m_ebBC

protected

m_dxFine

Real EBConductivityOp::m_dxFine

protected

m_dx

Real EBConductivityOp::m_dx

protected

m_dxCoar

Real EBConductivityOp::m_dxCoar

protected

m_acoef

RefCountedPtr<LevelData<EBCellFAB> > EBConductivityOp::m_acoef

protected

"Current" (time-interpolated) value of the a coefficient. For a time-independent a coefficient, this is where the coefficient lives.

m_acoef0

RefCountedPtr<LevelData<EBCellFAB> > EBConductivityOp::m_acoef0

protected

The a coefficient at the beginning of the time step. This is NULL if the conductivity operator is time independent.

m_acoef1

RefCountedPtr<LevelData<EBCellFAB> > EBConductivityOp::m_acoef1

protected

The a coefficient at the end of the time step. This is NULL if the conductivity operator is time independent.

m_bcoef

RefCountedPtr<LevelData<EBFluxFAB> > EBConductivityOp::m_bcoef

protected

"Current" (time-interpolated) value of the b coefficient. For a time-independent a coefficient, this is where the coefficient lives.

m_bcoIrreg

RefCountedPtr<LevelData<BaseIVFAB<Real> > > EBConductivityOp::m_bcoIrreg

protected

"Current" (time-interpolated) value of the b coefficient on irregular cells.

m_alpha

Real EBConductivityOp::m_alpha

protected

m_beta

Real EBConductivityOp::m_beta

protected

m_alphaDiagWeight

LayoutData<BaseIVFAB<Real> > EBConductivityOp::m_alphaDiagWeight

protected

m_betaDiagWeight

LayoutData<BaseIVFAB<Real> > EBConductivityOp::m_betaDiagWeight

protected

m_refToFine

int EBConductivityOp::m_refToFine

protected

m_refToCoar

int EBConductivityOp::m_refToCoar

protected

m_hasEBCF

bool EBConductivityOp::m_hasEBCF

protected

m_hasFine

bool EBConductivityOp::m_hasFine

protected

m_hasInterpAve

bool EBConductivityOp::m_hasInterpAve

protected

m_hasCoar

bool EBConductivityOp::m_hasCoar

protected

m_ebAverage

EBMGAverage EBConductivityOp::m_ebAverage

protected

m_ebInterp

EBMGInterp EBConductivityOp::m_ebInterp

protected

m_opEBStencil

LayoutData<RefCountedPtr<EBStencil> > EBConductivityOp::m_opEBStencil

protected

m_relCoef

LevelData<EBCellFAB> EBConductivityOp::m_relCoef

protected

Multigrid relaxation coefficient.

m_vofIterIrreg

LayoutData<VoFIterator > EBConductivityOp::m_vofIterIrreg

protected

m_vofIterMulti

LayoutData<VoFIterator > EBConductivityOp::m_vofIterMulti

protected

m_vofIterDomLo

LayoutData<VoFIterator > EBConductivityOp::m_vofIterDomLo[CH_SPACEDIM]

protected

m_vofIterDomHi

LayoutData<VoFIterator > EBConductivityOp::m_vofIterDomHi[CH_SPACEDIM]

protected

m_loCFIVS

LayoutData<CFIVS> EBConductivityOp::m_loCFIVS[SpaceDim]

protected

m_hiCFIVS

LayoutData<CFIVS> EBConductivityOp::m_hiCFIVS[SpaceDim]

protected

m_fastFR

EBFastFR EBConductivityOp::m_fastFR

protected

m_hasMGObjects

bool EBConductivityOp::m_hasMGObjects

protected

m_layoutChanged

bool EBConductivityOp::m_layoutChanged

protected

m_ebAverageMG

EBMGAverage EBConductivityOp::m_ebAverageMG

protected

m_ebInterpMG

EBMGInterp EBConductivityOp::m_ebInterpMG

protected

m_dblCoarMG

DisjointBoxLayout EBConductivityOp::m_dblCoarMG

protected

m_ebislCoarMG

EBISLayout EBConductivityOp::m_ebislCoarMG

protected

m_domainCoarMG

ProblemDomain EBConductivityOp::m_domainCoarMG

protected

m_colors

Vector<IntVect> EBConductivityOp::m_colors

protected

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The documentation for this class was generated from the following file:

• EBConductivityOp.H