newMappedGridIO.H File Reference

#include "NewCoordSys.H"
#include "MultiBlockCoordSys.H"
#include "AMRIO.H"
#include "NodeAMRIO.H"
#include "REAL.H"
#include <string>
#include "NamespaceHeader.H"
#include "NamespaceFooter.H"

Include dependency graph for newMappedGridIO.H:

Go to the source code of this file.

Macros
#define	_NEWMAPPEDGRIDIO_H_

Functions
void	WriteMappedUGHDF5 (const string &a_fileRoot, const DisjointBoxLayout &a_grids, const LevelData< FArrayBox > &a_data, const NewCoordSys &a_CoordSys, const Box &a_domainBox, const Real &a_time, bool a_writeMapping=true)
	Write single-level of mapped-grid data in HDF5 format. More...
void	WriteMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< string > &a_vectNames, const Vector< const NewCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Real &a_dt, const Real &a_time, const Vector< int > &a_vectRatio, const int &a_numLevels, bool a_writeMapping=true)
void	WriteMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< const NewCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Vector< int > &a_vectRatio, const int &a_numLevels, const Real &a_time, bool a_writeMapping=true)
void	WriteMappedUGHDF5 (const string &a_fileRoot, const DisjointBoxLayout &a_grids, const LevelData< FArrayBox > &a_data, const MultiBlockCoordSys &a_CoordSys, const Box &a_domainBox, const Real &a_time, bool a_writeMapping=true)
	Write single-level of multiblock mapped-grid data in HDF5 format. More...
void	WriteMappedUGHDF5 (const string &a_fileRoot, const DisjointBoxLayout &a_grids, const LevelData< FArrayBox > &a_data, const MultiBlockCoordSys &a_CoordSys, const Box &a_domainBox, const Vector< string > &outputNames, const Real &a_time, bool a_writeMapping=true)
void	WriteMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< string > &a_vectNames, const Vector< const MultiBlockCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Real &a_dt, const Real &a_time, const Vector< int > &a_vectRatio, const int &a_numLevels, bool a_writeMapping=true)
void	WriteMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< const MultiBlockCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Vector< int > &a_vectRatio, const int &a_numLevels, const Real &a_time, bool a_writeMapping=true)
void	WriteAnisotropicMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< const MultiBlockCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Vector< IntVect > &a_vectRatios, const int &a_numLevels, const Real &a_time, bool a_writeMapping=true)
void	WriteAnisotropicMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< string > &a_vectNames, const Vector< const MultiBlockCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Real &a_dt, const Real &a_time, const Vector< IntVect > &a_vectRatio, const int &a_numLevels, bool a_writeMapping=true)
void	WriteAnisotropicMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< string > &a_vectNames, const Vector< const NewCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Real &a_dt, const Real &a_time, const Vector< IntVect > &a_vectRatios, const int &a_numLevels, bool a_writeMapping=true)
void	WriteAnisotropicMappedAMRHierarchyHDF5 (const string &fileRoot, const Vector< DisjointBoxLayout > &a_vectGrids, const Vector< LevelData< FArrayBox > * > &a_vectData, const Vector< const NewCoordSys * > &a_vectCoordsys, const Box &a_baseDomainBox, const Vector< IntVect > &a_vectRatios, const int &a_numLevels, const Real &a_time, bool a_writeMapping=true)

Macro Definition Documentation

_NEWMAPPEDGRIDIO_H_

#define _NEWMAPPEDGRIDIO_H_

Function Documentation

WriteMappedUGHDF5() [1/3]

void WriteMappedUGHDF5	(	const string &	a_fileRoot,
		const DisjointBoxLayout &	a_grids,
		const LevelData< FArrayBox > &	a_data,
		const NewCoordSys &	a_CoordSys,
		const Box &	a_domainBox,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

Write single-level of mapped-grid data in HDF5 format.

Writes a single level in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation. This is blocking.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

Arguments:

• a_fileRoot: root of files to output to.
• a_grids : grids
• a_data : data
• a_names : names of variables.
• a_CoordSys: coordinate system
• a_writeMapping: if false, don't write the second ("map") file

WriteMappedAMRHierarchyHDF5() [1/4]

void WriteMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< string > &	a_vectNames,
		const Vector< const NewCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Real &	a_dt,
		const Real &	a_time,
		const Vector< int > &	a_vectRatio,
		const int &	a_numLevels,
		bool	a_writeMapping = true
	)

Writes hierarchy of mapped levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectNames: names of variables.\ a_vectCoordSys: coordinate systems for each AMR level. \ a_dt : time step at coarsest level.\ a_time : time.\ a_vectRatio : refinement ratio at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \

This is blocking.

WriteMappedAMRHierarchyHDF5() [2/4]

void WriteMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< const NewCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Vector< int > &	a_vectRatio,
		const int &	a_numLevels,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

Writes hierarchy of levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectCoordSys: coordinate systems for each AMR level. \ a_vectRatio : refinement ratio at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \ This is blocking.

WriteMappedUGHDF5() [2/3]

void WriteMappedUGHDF5	(	const string &	a_fileRoot,
		const DisjointBoxLayout &	a_grids,
		const LevelData< FArrayBox > &	a_data,
		const MultiBlockCoordSys &	a_CoordSys,
		const Box &	a_domainBox,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

Write single-level of multiblock mapped-grid data in HDF5 format.

Writes a single level in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation. This is blocking.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

Arguments:

• a_fileRoot: root of files to output to.
• a_grids : grids
• a_data : data
• a_names : names of variables.
• a_CoordSys: multiblock coordinate system
• a_writeMapping: if false, don't write the second ("map") file

WriteMappedUGHDF5() [3/3]

void WriteMappedUGHDF5	(	const string &	a_fileRoot,
		const DisjointBoxLayout &	a_grids,
		const LevelData< FArrayBox > &	a_data,
		const MultiBlockCoordSys &	a_CoordSys,
		const Box &	a_domainBox,
		const Vector< string > &	outputNames,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

WriteMappedAMRHierarchyHDF5() [3/4]

void WriteMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< string > &	a_vectNames,
		const Vector< const MultiBlockCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Real &	a_dt,
		const Real &	a_time,
		const Vector< int > &	a_vectRatio,
		const int &	a_numLevels,
		bool	a_writeMapping = true
	)

Writes hierarchy of multiblock mapped levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information b (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectNames: names of variables.\ a_vectCoordSys: multiblock coordinate systems for each AMR level. \ a_dt : time step at coarsest level.\ a_time : time.\ a_vectRatio : refinement ratio at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \

This is blocking.

WriteMappedAMRHierarchyHDF5() [4/4]

void WriteMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< const MultiBlockCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Vector< int > &	a_vectRatio,
		const int &	a_numLevels,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

Writes hierarchy of levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectCoordSys: coordinate systems for each AMR level. \ a_vectRatio : refinement ratio at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \ This is blocking.

WriteAnisotropicMappedAMRHierarchyHDF5() [1/4]

void WriteAnisotropicMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< const MultiBlockCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Vector< IntVect > &	a_vectRatios,
		const int &	a_numLevels,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

Writes hierarchy of levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectCoordSys: coordinate systems for each AMR level. \ a_vectRatios: refinement ratio in each direction at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \ This is blocking.

WriteAnisotropicMappedAMRHierarchyHDF5() [2/4]

void WriteAnisotropicMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< string > &	a_vectNames,
		const Vector< const MultiBlockCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Real &	a_dt,
		const Real &	a_time,
		const Vector< IntVect > &	a_vectRatio,
		const int &	a_numLevels,
		bool	a_writeMapping = true
	)

Writes hierarchy of multiblock mapped levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectNames: names of variables.\ a_vectCoordSys: multiblock coordinate systems for each AMR level. \ a_dt : time step at coarsest level.\ a_time : time.\ a_vectRatios: refinement ratio in each direction at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \

This is blocking.

WriteAnisotropicMappedAMRHierarchyHDF5() [3/4]

void WriteAnisotropicMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< string > &	a_vectNames,
		const Vector< const NewCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Real &	a_dt,
		const Real &	a_time,
		const Vector< IntVect > &	a_vectRatios,
		const int &	a_numLevels,
		bool	a_writeMapping = true
	)

Writes hierarchy of mapped levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectNames: names of variables.\ a_vectCoordSys: coordinate systems for each AMR level. \ a_dt : time step at coarsest level.\ a_time : time.\ a_vectRatio : refinement ratio in each direction at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \

This is blocking.

WriteAnisotropicMappedAMRHierarchyHDF5() [4/4]

void WriteAnisotropicMappedAMRHierarchyHDF5	(	const string &	fileRoot,
		const Vector< DisjointBoxLayout > &	a_vectGrids,
		const Vector< LevelData< FArrayBox > * > &	a_vectData,
		const Vector< const NewCoordSys * > &	a_vectCoordsys,
		const Box &	a_baseDomainBox,
		const Vector< IntVect > &	a_vectRatios,
		const int &	a_numLevels,
		const Real &	a_time,
		bool	a_writeMapping = true
	)

Writes hierarchy of levels in HDF5 format. Only available if the preprocessor macro HDF5 is defined at compilation.

Opens and writes to 2 files: fileRoot.<DIM>d.hdf5 contains the cell-centered dataset, while fileRoot.map.<DIM>d.hdf5 contains the node-centered mapped-grid information (which is the real-space locations of the nodes in mapped space.)

{ Arguments:}\ fileRoot : root of files to output to.\ a_vectGrids : grids at each level.\ a_vectData : data at each level.\ a_vectCoordSys: coordinate systems for each AMR level. \ a_vectRatio : refinement ratio in each direction at all levels (ith entry is refinement ratio between levels i and i + 1).\ a_numLevels : number of levels to output.\ a_writeMapping: if false, don't write the second ("map") file \

This is blocking.