#include <WarpedCS.H>

Inheritance diagram for WarpedCS:

Public Member Functions
	WarpedCS (const RealVect &a_dX, const RealVect &a_scale, const Real a_rtol=RTOL, const Real a_atol=ATOL, const int a_imax=100)
	constructor More...

virtual	~WarpedCS ()

RealVect	realCoord (const RealVect &a_Xi) const
	given coordinate in mapped space, return its location in real space More...

RealVect	mappedCoord (const RealVect &a_x) const
	given coordinate in real space, return its location in the mapped space More...

virtual Real	dXdXi (const RealVect &a_Xi, int a_dirX, int a_dirXi) const
	note that a_Xi is in mapped space. More...

virtual void	setTime (const Real &a_time) const
	Sets the time for moving grids and adjusts m_scale. More...

void	scale (const RealVect &a_scale)
	initialize scale More...

Public Member Functions inherited from NewFourthOrderCoordSys
	NewFourthOrderCoordSys ()
	default constructor More...

virtual	~NewFourthOrderCoordSys ()

virtual void	realCoord (FArrayBox &a_x, const FArrayBox &a_Xi, const Box &a_box) const
	given coordinates in mapped space, return locations in real space More...

virtual void	mappedCoord (FArrayBox &a_Xi, const FArrayBox &a_x, const Box &a_box) const
	given coordinate in real space, return its location in the mapped space More...

virtual void	getNodeRealCoordinates (FArrayBox &a_nodeCoords, const Box &a_box) const
	return Cartesian XYZ locations of nodes More...

virtual void	dXdXi (FArrayBox &a_dxdXi, const FArrayBox &a_Xi, int a_destComp, int a_dirX, int a_dirXi, const Box &a_box) const
	note that a_X is in mapped space. More...

virtual int	getNumN () const
	returns number of components in the metric term matrix (N) More...

virtual int	getNcomponent (const int a_row, const int a_col) const
	index function into face-centered metric terms More...

virtual void	volFlux (FluxBox &a_volFlux, const FluxBox &a_Nt, const Box &a_box) const
	computes the volume flux on the faces More...

virtual void	cellVol (FArrayBox &a_vol, const FluxBox &a_N, const Box &a_box) const
	computes cell volumes More...

virtual void	getN (FluxBox &a_N, const Box &a_box) const
	computes integral of N over each face of a_box More...

virtual void	getAvgJ (FArrayBox &a_avgJ, const FluxBox &a_volFlux, const Box &a_box) const
	computes cell-averaged J More...

virtual void	getAvgJ (FArrayBox &a_avgJ, const Box &a_box) const
	computes cell-averaged J More...

virtual void	getAvgJinverse (FluxBox &a_avgJinverse, const Box &a_box) const
	computes cell-averaged 1/J More...

virtual void	getAvgJinverse (FluxBox &a_avgJinverse, const FArrayBox &a_avgJ, const Box &a_box) const
	computes cell-averaged 1/J, using pre-computed cell-avg J More...

virtual Real	pointwiseJ (const RealVect &a_Xi) const
	Jacobian evaluated at location Xi in mapped space. More...

virtual void	pointwiseJ (FArrayBox &a_J, const FArrayBox &a_Xi, const Box &a_box) const
	Jacobian evaluated at locations Xi in mapped space. More...

virtual void	computeMetricTermProductAverage (FluxBox &a_product, const FluxBox &a_F, const FluxBox &a_N, const int a_NNumComp, const FluxBox &a_FforGrad, const Box &a_box, bool a_fourthOrder=true, Interval a_varIntervalProduct=Interval(), Interval a_varIntervalF=Interval(), int a_fluxSpaceContiguous=1, const ProblemDomain *const a_problemDomainPtr=NULL) const
	Computes 4th-order average of product = N^T*F. F can be a flux dyad. More...

virtual void	computeMetricTermProductAverage (FluxBox &a_product, const FluxBox &a_F, const FluxBox &a_N, const FluxBox &a_FforGrad, const Box &a_box, bool a_fourthOrder=true) const
	computes 4th-order average of product = N^T*F. F is vector of a scalar More...

virtual void	computeMetricTermProductAverage (FluxBox &a_product, const FluxBox &a_F, const FluxBox &a_N, const Box &a_box, bool a_fourthOrder=true) const
	computes 4th-order average of product = N^T*F. F is vector of a scalar More...

void	magnitudeN (FluxBox &a_NMag, const FluxBox &a_N, const Box &a_box) const
	Computes magnitude of <N^T> on each face. More...

virtual void	computeNJinverse (FluxBox &a_NJinverse, const FluxBox &a_Jinverse, const FluxBox &a_N, const Box &a_cellBox) const
	given N and Jinverse, computes N/J More...

virtual const RealVect &	dx () const
	access function to simplify things – returns mapped-space cell spacing More...

virtual Real	getN (const RealVect &a_Xi, int a_s, int a_d, int a_d1) const
	this evaluates the script N values from equation 12 in Phil's notes More...

virtual Real	getNMatrixEntry (const RealVect &a_Xi, int a_s, int a_d, int a_d1, int a_row, int a_column) const
	note that a_Xi is in mapped space. More...

virtual void	integrateScriptN (FArrayBox &a_scrN, const int a_dir0, const int a_dir1, const Box &a_box) const

virtual void	incrementFaceMetricWithEdgeTerm (FArrayBox &a_faceMetrics, int a_faceDir, int a_edgeDir, const Box &a_box, const Side::LoHiSide &a_side) const

virtual void	computeTransverseFaceMetric (FArrayBox &a_faceMetrics, const Box &a_box, int a_faceDir, int a_dDir) const

virtual void	computeTangentialGrad (FluxBox &a_gradPhi, const FluxBox &a_phiFace, const Box &a_box) const

virtual int	tanGradComp (const int a_faceDir, const int a_tanDir, const int a_comp) const

virtual void	contravariantMetric (FArrayBox &a_metric, int a_dir) const
	return row a_idir of contravariant metric More...

virtual void	orthonormalize (FluxBox &a_flux, const Interval &a_vectorIntv) const
	convert vector components (in a_vectorIntv) of a_flux to orthonormal frame to that of this block More...

virtual void	orthonormalize (FArrayBox &a_fluxFab, const Interval &a_vectorIntv) const
	overwrite vector components (in a_vectorIntv) of a_fluxFab with orthonormalized More...

virtual void	orthonormalize (const FArrayBox &a_csFab, FArrayBox &a_orthoFab, const Box &a_box, int a_idir, const IntVect &a_csComps, const IntVect &a_orthoComps) const
	convert components in a_csComps of vector a_csFab in coordinate-system basis to components in a_orthoComps of vector a_orthoFab in orthonormal basis, at points with indices in a_box, on lines where direction a_idir is constant More...

virtual void	deorthonormalize (FluxBox &a_flux, const Interval &a_vectorIntv) const
	convert vector components (in a_vectorIntv) of a_flux from orthonormal frame to that of this block More...

virtual void	deorthonormalize (FArrayBox &a_fluxFab, const Interval &a_vectorIntv) const
	overwrite vector components (in a_vectorIntv) of a_fluxFab with deorthonormalized More...

virtual void	deorthonormalize (const FArrayBox &a_orthoFab, FArrayBox &a_csFab, const Box &a_box, int a_idir, const IntVect &a_orthoComps, const IntVect &a_csComps) const
	convert components in a_orthoComps of vector a_orthoFab in orthonormal basis to components in a_csComps of vector a_csFab in coordinate-system basis, at points with indices in a_box, on lines where direction a_idir is constant More...

Public Member Functions inherited from NewCoordSys
	NewCoordSys ()
	default constructor More...

virtual	~NewCoordSys ()

virtual void	getCenterMappedCoordinates (FArrayBox &a_Xi, const Box &a_box) const
	given indices in a_box, return centers of cells (or of faces, or of edges) in mapped coordinates. The function does the right thing based on the centering of a_box, which must be the same centering as a_Xi. More...

virtual RealVect	centerMappedCoordinates (const IntVect &a_iv) const
	given indices, return centers of cells in mapped coordinates More...

virtual int	dimension () const
	returns dimensionality of the space More...

virtual void	computeDivergence (FArrayBox &a_divF, const FluxBox &a_F, const FluxBox &a_N, const Box &a_box, Interval &divInterval) const
	returns integral of divergence over mapped-grid cells More...

virtual VectorTransformation	vectorTransformationMappedToReal (const RealVect &a_Xi) const
	return matrix that transforms vector components from mapped space to real space at point a_Xi in mapped space More...

virtual VectorTransformation	vectorTransformationRealToMapped (const RealVect &a_Xi) const
	return matrix that transforms vector components from real space to mapped space at point a_Xi in mapped space More...

virtual VectorTransformation	vectorTransformationMappedToRealCenter (const IntVect &a_iv) const
	return matrix that transforms vector components from mapped space to real space at center of cell a_iv More...

virtual VectorTransformation	vectorTransformationRealToMappedCenter (const IntVect &a_iv) const
	return matrix that transforms vector components from real space to mapped space at center of cell a_iv More...

virtual void	vectorTransformMappedToRealCenterFab (FArrayBox &a_vectorFab) const
	transform a FAB of SpaceDim-vectors from mapped-coordinate basis to real-coordinate basis at cell centers More...

virtual void	vectorTransformMappedToRealAvgFab (FArrayBox &a_vectorFab, const FArrayBox &a_gradVectorFab) const
	transform a FAB of SpaceDim-vectors from mapped-coordinate basis to real-coordinate basis, averaged over cells More...

virtual void	vectorTransformRealToMappedCenterFab (FArrayBox &a_vectorFab) const
	transform a FAB of SpaceDim-vectors from real-coordinate basis to mapped-coordinate basis at cell centers More...

virtual void	vectorTransformRealToMappedAvgFab (FArrayBox &a_vectorFab, const FArrayBox &a_gradVectorFab) const
	transform a FAB of SpaceDim-vectors from real-coordinate basis to mapped-coordinate basis, averaged over cells More...

Protected Member Functions
Real	g (const Real xi, const RealVect &x) const

Protected Member Functions inherited from NewCoordSys
virtual void	vectorTransformInternalAvgFab (FArrayBox &a_vectorFab, const FArrayBox &a_gradVectorFab, const BaseFab< VectorTransformation > &a_tfmCenterFab) const
	internal function to transform a FAB of SpaceDim-vectors from one basis to another, averaged over cells, given BaseFab of vector transformations at cell centers More...

Protected Attributes
RealVect	m_scale
	The 'c'. More...

const RealVect	m_staticScale

Real	m_rtol

Real	m_atol

int	m_imax

const Real	m_twoPi

int	m_rootDir

Protected Attributes inherited from NewFourthOrderCoordSys
RealVect	m_dx

Interval	m_volInterval

EdgeQuadrature *	m_quadraturePtr

Protected Attributes inherited from NewCoordSys
Real	m_time
	Const is already well entrenched. More...

Additional Inherited Members
Static Public Member Functions inherited from NewFourthOrderCoordSys
static const IntVect &	metricsCompDir (const int a_iDir)
	Same as getNcomponent but returns an IntVect for an 'a_col' (direction) More...

Detailed Description

"warped" Coordinate mapping (non-constant Jacobian)

Constructor & Destructor Documentation

◆ WarpedCS()

WarpedCS::WarpedCS	(	const RealVect &	a_dX,
		const RealVect &	a_scale,
		const Real	a_rtol = `RTOL`,
		const Real	a_atol = `ATOL`,
		const int	a_imax = `100`
	)

constructor

◆ ~WarpedCS()

virtual WarpedCS::~WarpedCS ( )

virtual

Destructor.

Member Function Documentation

◆ realCoord()

RealVect WarpedCS::realCoord ( const RealVect & a_Xi ) const

virtual

given coordinate in mapped space, return its location in real space

Implements NewFourthOrderCoordSys.

◆ mappedCoord()

RealVect WarpedCS::mappedCoord ( const RealVect & a_x ) const

virtual

given coordinate in real space, return its location in the mapped space

Implements NewFourthOrderCoordSys.

◆ dXdXi()

virtual Real WarpedCS::dXdXi	(	const RealVect &	a_Xi,
		int	a_dirX,
		int	a_dirXi
	)		const

virtual

note that a_Xi is in mapped space.

Implements NewFourthOrderCoordSys.

◆ setTime()

virtual void WarpedCS::setTime ( const Real & a_time ) const

virtual

Sets the time for moving grids and adjusts m_scale.

Reimplemented from NewCoordSys.

◆ scale()

void WarpedCS::scale ( const RealVect & a_scale )

initialize scale

◆ g()

Real WarpedCS::g	(	const Real	xi,
		const RealVect &	x
	)		const

protected

Member Data Documentation

◆ m_scale

RealVect WarpedCS::m_scale

mutableprotected

The 'c'.

◆ m_staticScale

const RealVect WarpedCS::m_staticScale

protected

Preserves initial scale argument given to constructor for moving grids

◆ m_rtol

Real WarpedCS::m_rtol

protected

◆ m_atol

Real WarpedCS::m_atol

protected

◆ m_imax

int WarpedCS::m_imax

protected

◆ m_twoPi

const Real WarpedCS::m_twoPi

protected

◆ m_rootDir

int WarpedCS::m_rootDir

mutableprotected

The documentation for this class was generated from the following file:

WarpedCS.H

Public Member Functions

Protected Member Functions

Protected Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ WarpedCS()

◆ ~WarpedCS()

Member Function Documentation

◆ realCoord()

◆ mappedCoord()

◆ dXdXi()

◆ setTime()

◆ scale()

◆ g()

Member Data Documentation

◆ m_scale

◆ m_staticScale

◆ m_rtol

◆ m_atol

◆ m_imax

◆ m_twoPi

◆ m_rootDir